RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 IL6RP08887 468 aaPredicted RBP12.03□□□□□ -0.48
FOXA3-202ENST00000594297 SPCS3P61009 180 aa12.03□□□□□ -0.48
FOXA3-202ENST00000594297 ZNF562Q6V9R5 426 aa12.03□□□□□ -0.48
FOXA3-202ENST00000594297 HSD17B13Q7Z5P4 300 aaPredicted RBP12.03□□□□□ -0.48
FOXA3-202ENST00000594297 FAM71E2Q8N5Q1 922 aa12.03□□□□□ -0.48
FOXA3-202ENST00000594297 C5orf56Q8N8D9 126 aa12.03□□□□□ -0.48
FOXA3-202ENST00000594297 Q8N9W7 124 aa12.03□□□□□ -0.48
FOXA3-202ENST00000594297 ABHD5Q8WTS1 349 aa12.03□□□□□ -0.48
FOXA3-202ENST00000594297 P2RX4Q99571 388 aa12.03□□□□□ -0.48
FOXA3-202ENST00000594297 HINT2Q9BX68 163 aa12.03□□□□□ -0.48
FOXA3-202ENST00000594297 TMEM14BQ9NUH8 114 aa12.03□□□□□ -0.48
FOXA3-202ENST00000594297 ZMAT5Q9UDW3 170 aaKnown RBP12.03□□□□□ -0.48
FOXA3-202ENST00000594297 NSG2Q9Y328 171 aa12.03□□□□□ -0.48
FOXA3-202ENST00000594297 A0A0G2JRQ6 117 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 A0A1W2PN81 502 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 PSMB11A5LHX3 300 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 CEBPZOSA8MTT3 80 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 NUDT19A8MXV4 375 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 PFDN1O60925 122 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 CA2P00918 260 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 CXCL3P19876 107 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 CHRNA7P36544 502 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 RPL27AP46776 148 aaKnown RBP12.02□□□□□ -0.49
FOXA3-202ENST00000594297 OR2B8PP59922 312 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 RPP30P78346 268 aaKnown RBP12.02□□□□□ -0.49
FOXA3-202ENST00000594297 FXYD3Q14802 87 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 IZUMO4Q1ZYL8 232 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 C9orf152Q5JTZ5 239 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 Q6ZRM9 215 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 ZNF329Q86UD4 541 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 DUX3Q96PT4 197 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 CIB3Q96Q77 187 aaPredicted RBP12.02□□□□□ -0.49
FOXA3-202ENST00000594297 FYTTD1Q96QD9 318 aaKnown RBP12.02□□□□□ -0.49
FOXA3-202ENST00000594297 HIPK2Q9H2X6 1198 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 PLEKHA3Q9HB20 300 aa12.02□□□□□ -0.49
FOXA3-202ENST00000594297 STARD9Q9P2P6 4700 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 TRAV3A0A0B4J244 114 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 MPTX1A8MV57 137 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 L7N2F9 121 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 PITX3O75364 302 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 PSMB6P28072 239 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 MYCNOSP40205 109 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 HOXA1P49639 335 aaPredicted RBP12.01□□□□□ -0.49
FOXA3-202ENST00000594297 H2BFSP57053 126 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 S100A10P60903 97 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 VAMP2P63027 116 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 TMEM267Q0VDI3 215 aaPredicted RBP12.01□□□□□ -0.49
FOXA3-202ENST00000594297 KLHL30-AS1Q8NEE0 82 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 THAP6Q8TBB0 222 aa12.01□□□□□ -0.49
FOXA3-202ENST00000594297 RBMXL1Q96E39 390 aaKnown RBP12.01□□□□□ -0.49
FOXA3-202ENST00000594297 SRSF8Q9BRL6 282 aaKnown RBP12.01□□□□□ -0.49
FOXA3-202ENST00000594297 QTRT1Q9BXR0 403 aaKnown RBP12.01□□□□□ -0.49
FOXA3-202ENST00000594297 TEX50A0A1B0GTY4 177 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 CYB5BO43169 146 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 SYNGR2O43760 224 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 CX3CL1P78423 397 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 ERHP84090 104 aaKnown RBP12□□□□□ -0.49
FOXA3-202ENST00000594297 ID3Q02535 119 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 AARDQ4LEZ3 155 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 OR4D5Q8NGN0 318 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 ARPC1AQ92747 370 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 TMEM68Q96MH6 324 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 RAB40CQ96S21 281 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 KRTAP17-1Q9BYP8 105 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 HEYLQ9NQ87 328 aaPredicted RBP12□□□□□ -0.49
FOXA3-202ENST00000594297 TPSG1Q9NRR2 321 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 HSPB7Q9UBY9 170 aa12□□□□□ -0.49
FOXA3-202ENST00000594297 LSM5Q9Y4Y9 91 aaKnown RBP12□□□□□ -0.49
FOXA3-202ENST00000594297 FCN1O00602 326 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 NUP62P37198 522 aaPredicted RBP11.99□□□□□ -0.49
FOXA3-202ENST00000594297 SNCAP37840 140 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 SUB1P53999 127 aaKnown RBP eCLIP11.99□□□□□ -0.49
FOXA3-202ENST00000594297 PRCDQ00LT1 54 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 PJVKQ0ZLH3 352 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 LRRC37A5PQ49AS3 106 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 CXorf66Q5JRM2 361 aaPredicted RBP11.99□□□□□ -0.49
FOXA3-202ENST00000594297 SLC35E3Q7Z769 313 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 NOXA1Q86UR1 476 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 OR2T35Q8NGX2 323 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 GRPEL2Q8TAA5 225 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 PPP1R1CQ8WVI7 109 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 SRSF12Q8WXF0 261 aaKnown RBP11.99□□□□□ -0.49
FOXA3-202ENST00000594297 RCHY1Q96PM5 261 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 GON7Q9BXV9 100 aa11.99□□□□□ -0.49
FOXA3-202ENST00000594297 NXPH3O95157 252 aa11.98□□□□□ -0.49
FOXA3-202ENST00000594297 MBPP02686 304 aaPredicted RBP11.98□□□□□ -0.49
FOXA3-202ENST00000594297 LYL1P12980 280 aa11.98□□□□□ -0.49
FOXA3-202ENST00000594297 ATP5IP56385 69 aaPredicted RBP11.98□□□□□ -0.49
FOXA3-202ENST00000594297 DTD1Q8TEA8 209 aa11.98□□□□□ -0.49
FOXA3-202ENST00000594297 NOL4LQ96MY1 436 aaPredicted RBP11.98□□□□□ -0.49
FOXA3-202ENST00000594297 MAGT1Q9H0U3 335 aa11.98□□□□□ -0.49
FOXA3-202ENST00000594297 RBKSQ9H477 322 aa11.98□□□□□ -0.49
FOXA3-202ENST00000594297 PARP11Q9NR21 331 aa11.98□□□□□ -0.49
FOXA3-202ENST00000594297 NDUFA4L2Q9NRX3 87 aa11.98□□□□□ -0.49
FOXA3-202ENST00000594297 CSMD3Q7Z407 3707 aa11.97□□□□□ -0.49
FOXA3-202ENST00000594297 MSGN1A6NI15 193 aa11.97□□□□□ -0.49
FOXA3-202ENST00000594297 E5RGE8 158 aa11.97□□□□□ -0.49
FOXA3-202ENST00000594297 AP4M1O00189 453 aa11.97□□□□□ -0.49
FOXA3-202ENST00000594297 SSSCA1O60232 199 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms