RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 OR10W1Q8NGF6 305 aa12.1□□□□□ -0.47
VRK3-207ENST00000594092 OR2G3Q8NGZ4 309 aa12.1□□□□□ -0.47
VRK3-207ENST00000594092 UQCC1Q9NVA1 299 aa12.1□□□□□ -0.47
VRK3-207ENST00000594092 UBE2L5PA0A1B0GUS4 154 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 A0A1W2PN81 502 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 ACTL6BO94805 426 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 CHRNA7P36544 502 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 COMPP49747 757 aaPredicted RBP12.09□□□□□ -0.47
VRK3-207ENST00000594092 BPIFB3P59826 476 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 SSBP2P81877 361 aaPredicted RBP12.09□□□□□ -0.47
VRK3-207ENST00000594092 RUNX1Q01196 453 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 LRRC75BQ2VPJ9 315 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 ETV3LQ6ZN32 361 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 TMEM182Q6ZP80 229 aaPredicted RBP12.09□□□□□ -0.47
VRK3-207ENST00000594092 PIFOQ8TCI5 191 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 WDR61Q9GZS3 305 aaKnown RBP12.09□□□□□ -0.47
VRK3-207ENST00000594092 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 NCBP2LA6PVI3 153 aaKnown RBP12.09□□□□□ -0.47
VRK3-207ENST00000594092 UMAD1C9J7I0 102 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 CA2P00918 260 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 IFNA4P05014 189 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 FBP1P09467 338 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 RPL27AP46776 148 aaKnown RBP12.09□□□□□ -0.47
VRK3-207ENST00000594092 GNB1P62873 340 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 TMEM170AQ8WVE7 144 aa12.09□□□□□ -0.47
VRK3-207ENST00000594092 NOTCH2Q04721 2471 aa12.08□□□□□ -0.48
VRK3-207ENST00000594092 INS-IGF2F8WCM5 200 aa12.08□□□□□ -0.48
VRK3-207ENST00000594092 PRH1P02810 166 aa12.08□□□□□ -0.48
VRK3-207ENST00000594092 ATP5IP56385 69 aaPredicted RBP12.08□□□□□ -0.48
VRK3-207ENST00000594092 ERHP84090 104 aaKnown RBP12.08□□□□□ -0.48
VRK3-207ENST00000594092 VWC2Q2TAL6 325 aa12.08□□□□□ -0.48
VRK3-207ENST00000594092 Q6ZRG5 221 aa12.08□□□□□ -0.48
VRK3-207ENST00000594092 NANPQ8TBE9 248 aa12.08□□□□□ -0.48
VRK3-207ENST00000594092 SSX3Q99909 188 aa12.08□□□□□ -0.48
VRK3-207ENST00000594092 GGACTQ9BVM4 153 aa12.08□□□□□ -0.48
VRK3-207ENST00000594092 PARP11Q9NR21 331 aa12.08□□□□□ -0.48
VRK3-207ENST00000594092 MFSD2BA6NFX1 497 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 TRIM77I1YAP6 450 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 CAMLGP49069 296 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 WT1-ASQ06250 92 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 PXDC1Q5TGL8 231 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 Q8N9W7 124 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 TAF15Q92804 592 aaKnown RBP eCLIP12.07□□□□□ -0.48
VRK3-207ENST00000594092 PSMG3Q9BT73 122 aaPredicted RBP12.07□□□□□ -0.48
VRK3-207ENST00000594092 C1RLQ9NZP8 487 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 TEX46H3BTG2 121 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 SNCAP37840 140 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 BSXQ3C1V8 233 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 AKR1C8PQ5T2L2 129 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 MRPL41Q8IXM3 137 aaKnown RBP12.07□□□□□ -0.48
VRK3-207ENST00000594092 BCL6BQ8N143 479 aaPredicted RBP12.07□□□□□ -0.48
VRK3-207ENST00000594092 SRSF12Q8WXF0 261 aaKnown RBP12.07□□□□□ -0.48
VRK3-207ENST00000594092 RSG1Q9BU20 258 aa12.07□□□□□ -0.48
VRK3-207ENST00000594092 ZFHX3Q15911 3703 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 MYO9AB2RTY4 2548 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 IGLC7A0M8Q6 106 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 TEX22C9J3V5 150 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 PRSS46E5RG02 174 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 CNIH1O95406 144 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 RNASE2P10153 161 aaKnown RBP12.06□□□□□ -0.48
VRK3-207ENST00000594092 FGF7P21781 194 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 DLK1P80370 383 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 KRTAP1-1Q07627 177 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 AANATQ16613 207 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 C2orf83Q53S99 150 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 HSD17B13Q7Z5P4 300 aaPredicted RBP12.06□□□□□ -0.48
VRK3-207ENST00000594092 RFNGQ9Y644 331 aa12.06□□□□□ -0.48
VRK3-207ENST00000594092 NAV3Q8IVL0 2385 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 MDFIC2A0A1B0GVS7 189 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 ANKRD34BA5PLL1 514 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 NUDT19A8MXV4 375 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 OR13C7P0DN81 318 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 DEFB112Q30KQ8 113 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 C9orf139Q6ZV77 190 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 TMEM219Q86XT9 240 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 C22orf15Q8WYQ4 148 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 HRH4Q9H3N8 390 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 FBXO7Q9Y3I1 522 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 TIMM9Q9Y5J7 89 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 TLN2Q9Y4G6 2542 aa12.05□□□□□ -0.48
VRK3-207ENST00000594092 SMCO3A2RU48 225 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 H3BUX3 64 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 CX3CL1P78423 397 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 SERF2P84101 59 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 ZNF616Q08AN1 781 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 FXYD3Q14802 87 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 TUSC1Q2TAM9 212 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 ZNF562Q6V9R5 426 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 EIF4E3Q8N5X7 224 aaKnown RBP12.04□□□□□ -0.48
VRK3-207ENST00000594092 FAM213BQ8TBF2 198 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 MARC2Q969Z3 335 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 RBM14Q96PK6 669 aaKnown RBP12.04□□□□□ -0.48
VRK3-207ENST00000594092 SLC25A33Q9BSK2 321 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 REG1AP05451 166 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 APELAP0DMC3 54 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 AREGP15514 252 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 FHITP49789 147 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 SUB1P53999 127 aaKnown RBP eCLIP12.04□□□□□ -0.48
VRK3-207ENST00000594092 DPPA3Q6W0C5 159 aa12.04□□□□□ -0.48
VRK3-207ENST00000594092 IL34Q6ZMJ4 242 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms