RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CCL24O00175 119 aa11.57□□□□□ -0.56
DDX39A-221ENST00000593026 CYB5BO43169 146 aa11.57□□□□□ -0.56
DDX39A-221ENST00000593026 OR2J3O76001 311 aa11.57□□□□□ -0.56
DDX39A-221ENST00000593026 MYCNOSP40205 109 aa11.57□□□□□ -0.56
DDX39A-221ENST00000593026 SMCO1Q147U7 214 aa11.57□□□□□ -0.56
DDX39A-221ENST00000593026 AARDQ4LEZ3 155 aa11.57□□□□□ -0.56
DDX39A-221ENST00000593026 FANCD2OSQ96PS1 177 aa11.57□□□□□ -0.56
DDX39A-221ENST00000593026 FBXL7Q9UJT9 491 aa11.57□□□□□ -0.56
DDX39A-221ENST00000593026 TMED3Q9Y3Q3 217 aa11.57□□□□□ -0.56
DDX39A-221ENST00000593026 A0A1B0GU03 582 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 HOXB5P09067 269 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 HOXA1P49639 335 aaPredicted RBP11.56□□□□□ -0.56
DDX39A-221ENST00000593026 SPCS3P61009 180 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 ERHP84090 104 aaKnown RBP11.56□□□□□ -0.56
DDX39A-221ENST00000593026 ATP5G2Q06055 141 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 C15orf32Q32M92 178 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 NRARPQ7Z6K4 114 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 OR2C3Q8N628 320 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 OR11H1Q8NG94 326 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 OR52B4Q8NGK2 314 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 OR52E5Q8NH55 327 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 ENY2Q9NPA8 101 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 CACFD1Q9UGQ2 172 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 F11RQ9Y624 299 aaKnown RBP11.56□□□□□ -0.56
DDX39A-221ENST00000593026 NBEAL1Q6ZS30 2694 aa11.56□□□□□ -0.56
DDX39A-221ENST00000593026 TRRAPQ9Y4A5 3859 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 IGLV11-55A0A075B6I3 123 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 NDUFB8O95169 186 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 ZNF616Q08AN1 781 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 EXOSC2Q13868 293 aaKnown RBP11.55□□□□□ -0.56
DDX39A-221ENST00000593026 KLK9Q2XQG4 91 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 PLET1Q6UQ28 207 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 DUSP18Q8NEJ0 188 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 OR1L6Q8NGR2 347 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 OR1N2Q8NGR9 330 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 OR1S1Q8NH92 325 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 DPF1Q92782 380 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 P2RX4Q99571 388 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 THYN1Q9P016 225 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 KLK9Q9UKQ9 250 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 VWFP04275 2813 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 WNK1Q9H4A3 2382 aa11.55□□□□□ -0.56
DDX39A-221ENST00000593026 ANKRD34BA5PLL1 514 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 CEBPZOSA8MTT3 80 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 INS-IGF2F8WCM5 200 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 ADAP1O75689 374 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 NXPH3O95157 252 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 SLC25A6P12236 298 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 CD33P20138 364 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 SNCAP37840 140 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 FHL3Q13643 280 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 PDLIM3Q53GG5 364 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-221ENST00000593026 GGNBP1Q5YKI7 109 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 SLC25A24Q6NUK1 477 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 ZNF343Q6P1L6 599 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 LINC00482Q8N8I6 264 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 ZNF114Q8NC26 417 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 OR1P1Q8NH06 330 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 ZNF431Q8TF32 576 aaPredicted RBP11.54□□□□□ -0.56
DDX39A-221ENST00000593026 MITD1Q8WV92 249 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 SEC22CQ9BRL7 303 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 DMRT1Q9Y5R6 373 aa11.54□□□□□ -0.56
DDX39A-221ENST00000593026 IGHV4OR15-8A0A075B7B6 117 aa11.53□□□□□ -0.56
DDX39A-221ENST00000593026 A0A087WW49 117 aa11.53□□□□□ -0.56
DDX39A-221ENST00000593026 LINC01619G3V211 115 aa11.53□□□□□ -0.56
DDX39A-221ENST00000593026 IFNA21P01568 189 aa11.53□□□□□ -0.56
DDX39A-221ENST00000593026 HSPB1P04792 205 aaKnown RBP11.53□□□□□ -0.56
DDX39A-221ENST00000593026 OR8U8P0C7N1 319 aa11.53□□□□□ -0.56
DDX39A-221ENST00000593026 MFAP2P55001 183 aa11.53□□□□□ -0.56
DDX39A-221ENST00000593026 TNFRSF9Q07011 255 aa11.53□□□□□ -0.56
DDX39A-221ENST00000593026 CXorf58Q96LI9 332 aa11.53□□□□□ -0.56
DDX39A-221ENST00000593026 HSPB7Q9UBY9 170 aa11.53□□□□□ -0.56
DDX39A-221ENST00000593026 IL5P05113 134 aa11.52□□□□□ -0.57
DDX39A-221ENST00000593026 FAM209BQ5JX69 171 aa11.52□□□□□ -0.57
DDX39A-221ENST00000593026 EEF1AKMT3Q96AZ1 226 aa11.52□□□□□ -0.57
DDX39A-221ENST00000593026 RANGRFQ9HD47 186 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-221ENST00000593026 PALMDQ9NP74 551 aa11.52□□□□□ -0.57
DDX39A-221ENST00000593026 HEYLQ9NQ87 328 aaPredicted RBP11.52□□□□□ -0.57
DDX39A-221ENST00000593026 PEF1Q9UBV8 284 aaKnown RBP11.52□□□□□ -0.57
DDX39A-221ENST00000593026 S4R3C0 116 aa11.52□□□□□ -0.57
DDX39A-221ENST00000593026 PKD1L1Q8TDX9 2849 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 MFSD2BA6NFX1 497 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 INMT-MINDY4F8WBC2 141 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 PITX3O75364 302 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 TRBV12-3P01733 135 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 IGHV3-23P01764 117 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 ZP3P21754 424 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 SUB1P53999 127 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDX39A-221ENST00000593026 C12orf45Q8N5I9 185 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-221ENST00000593026 UXS1Q8NBZ7 420 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 WFDC9Q8NEX5 89 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 VN1R17PQ8TDU5 208 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 DTD1Q8TEA8 209 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 MISP3Q96FF7 219 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 HIPK2Q9H2X6 1198 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 RBKSQ9H477 322 aa11.51□□□□□ -0.57
DDX39A-221ENST00000593026 GPN1Q9HCN4 374 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-221ENST00000593026 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.5□□□□□ -0.57
DDX39A-221ENST00000593026 TRBV7-1A0A0A6YYK4 115 aa11.5□□□□□ -0.57
DDX39A-221ENST00000593026 MPTX1A8MV57 137 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms