RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ZNF502Q8TBZ5 544 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 VN1R17PQ8TDU5 208 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 RRNAD1Q96FB5 475 aaKnown RBP9.18□□□□□ -0.94
TPM4-212ENST00000590180 RTBDNQ9BSG5 229 aaPredicted RBP9.18□□□□□ -0.94
TPM4-212ENST00000590180 THAP7Q9BT49 309 aaPredicted RBP9.18□□□□□ -0.94
TPM4-212ENST00000590180 NXF2Q9GZY0 626 aaKnown RBP9.18□□□□□ -0.94
TPM4-212ENST00000590180 SIGLEC8Q9NYZ4 499 aa9.18□□□□□ -0.94
TPM4-212ENST00000590180 ANKRD20A5PA0PJZ0 165 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 IZUMO1RA6ND01 250 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 C2orf70A6NJV1 201 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 LGALS9O00182 355 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 IFNA17P01571 189 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 IGKV1-5P01602 117 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 MFAP2P55001 183 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 PYDC2Q56P42 97 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 SPINK9Q5DT21 86 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 ADAMTSL5Q6ZMM2 481 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 SGPP2Q8IWX5 399 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 Q8N1Y9 231 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 Q8N402 240 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 SCARB1Q8WTV0 552 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 PRRT1Q99946 306 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 SOSTQ9BQB4 213 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 MCUBQ9NWR8 336 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 SCP2D1Q9UJQ7 156 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 GPR132Q9UNW8 380 aa9.17□□□□□ -0.94
TPM4-212ENST00000590180 OR2T8A6NH00 312 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 FRMD6-AS1P0C7T7 363 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 EDN2P20800 178 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 CBLN1P23435 193 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 UCP1P25874 307 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 ETV6P41212 452 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 PRCDQ00LT1 54 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 SURF2Q15527 256 aaPredicted RBP9.16□□□□□ -0.94
TPM4-212ENST00000590180 DEFB114Q30KQ6 69 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 CD300EQ496F6 205 aaPredicted RBP9.16□□□□□ -0.94
TPM4-212ENST00000590180 Q56UQ5 140 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 OR2C3Q8N628 320 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 UBAC2Q8NBM4 344 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 UXS1Q8NBZ7 420 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 OR2K2Q8NGT1 345 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 OR1P1Q8NH06 330 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 MISP3Q96FF7 219 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 SCGB3A2Q96PL1 93 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 PDCD10Q9BUL8 212 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 C5orf66Q9H5L9 145 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 NAA60Q9H7X0 242 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 PLEKHA3Q9HB20 300 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 PALMDQ9NP74 551 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 C21orf62Q9NYP8 219 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 SELENOKQ9Y6D0 94 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 U3KQK5 164 aa9.16□□□□□ -0.94
TPM4-212ENST00000590180 A0A0B4J293 547 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 TGOLN2O43493 480 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 B3GALNT1O75752 331 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 OR5AC1P0C628 307 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 IGHV4-30-4P0DP06 118 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 SNCAP37840 140 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 DHODHQ02127 395 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 GUCA2BQ16661 112 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 TM4SF20Q53R12 229 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 GTSCR1Q86UQ5 136 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 SBSPONQ8IVN8 264 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 SLC35G3Q8N808 338 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 CACNG8Q8WXS5 425 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 TMEM222Q9H0R3 208 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 TUBA4BQ9H853 241 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 ENY2Q9NPA8 101 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 TECRQ9NZ01 308 aaKnown RBP9.15□□□□□ -0.94
TPM4-212ENST00000590180 KCNIP3Q9Y2W7 256 aa9.15□□□□□ -0.94
TPM4-212ENST00000590180 ZNF785A8K8V0 405 aa9.14□□□□□ -0.95
TPM4-212ENST00000590180 K7EIM0 57 aa9.14□□□□□ -0.95
TPM4-212ENST00000590180 ST8SIA3O43173 380 aa9.14□□□□□ -0.95
TPM4-212ENST00000590180 CDS2O95674 445 aa9.14□□□□□ -0.95
TPM4-212ENST00000590180 AKR1C4P17516 323 aa9.14□□□□□ -0.95
TPM4-212ENST00000590180 MFAP4P55083 255 aa9.14□□□□□ -0.95
TPM4-212ENST00000590180 ZNF57Q68EA5 555 aaPredicted RBP9.14□□□□□ -0.95
TPM4-212ENST00000590180 UNQ9165/PRO28630Q6UXU0 137 aa9.14□□□□□ -0.95
TPM4-212ENST00000590180 SELENOHQ8IZQ5 122 aaKnown RBP9.14□□□□□ -0.95
TPM4-212ENST00000590180 TOMM5Q8N4H5 51 aa9.14□□□□□ -0.95
TPM4-212ENST00000590180 GLYATL2Q8WU03 294 aa9.14□□□□□ -0.95
TPM4-212ENST00000590180 PINX1Q96BK5 328 aaKnown RBP9.14□□□□□ -0.95
TPM4-212ENST00000590180 BSCL2Q96G97 398 aaPredicted RBP9.14□□□□□ -0.95
TPM4-212ENST00000590180 UFC1Q9Y3C8 167 aa9.14□□□□□ -0.95
TPM4-212ENST00000590180 TMEM213A2RRL7 107 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 CRYM-AS1A6NIL9 109 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 MT-CO2P00403 227 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 IGHV3-48P01763 117 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 P0C879 139 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 FAUP35544 74 aaKnown RBP9.13□□□□□ -0.95
TPM4-212ENST00000590180 SUB1P53999 127 aaKnown RBP eCLIP9.13□□□□□ -0.95
TPM4-212ENST00000590180 AP3S2P59780 193 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 TMEM268Q5VZI3 342 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 SPSB3Q6PJ21 355 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 Q6ZRM9 215 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 GPR146Q96CH1 333 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 WDR89Q96FK6 387 aaPredicted RBP9.13□□□□□ -0.95
TPM4-212ENST00000590180 WWC2-AS2Q96NR7 200 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 CHRDL1Q9BU40 450 aa9.13□□□□□ -0.95
TPM4-212ENST00000590180 C20orf24Q9BUV8 137 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms