RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 C6orf62Q9GZU0 229 aaPredicted RBP15.27■□□□□ 0.04
SMG8-204ENST00000580498 PLEKHA3Q9HB20 300 aa15.27■□□□□ 0.04
SMG8-204ENST00000580498 COL7A1Q02388 2944 aa15.27■□□□□ 0.03
SMG8-204ENST00000580498 SPCS2Q15005 226 aa15.26■□□□□ 0.03
SMG8-204ENST00000580498 Q56UQ5 140 aa15.26■□□□□ 0.03
SMG8-204ENST00000580498 LHFPL1Q86WI0 220 aa15.26■□□□□ 0.03
SMG8-204ENST00000580498 OR1P1Q8NH06 330 aa15.26■□□□□ 0.03
SMG8-204ENST00000580498 SEC22AQ96IW7 307 aa15.26■□□□□ 0.03
SMG8-204ENST00000580498 NEURL2Q9BR09 285 aa15.26■□□□□ 0.03
SMG8-204ENST00000580498 SPATA25Q9BR10 227 aa15.26■□□□□ 0.03
SMG8-204ENST00000580498 ZC4H2Q9NQZ6 224 aa15.26■□□□□ 0.03
SMG8-204ENST00000580498 C3orf85A0A1B0GTC6 90 aa15.25■□□□□ 0.03
SMG8-204ENST00000580498 CD74P04233 296 aa15.25■□□□□ 0.03
SMG8-204ENST00000580498 HSPE1P61604 102 aaKnown RBP15.25■□□□□ 0.03
SMG8-204ENST00000580498 RBPMS2Q6ZRY4 209 aaKnown RBP15.25■□□□□ 0.03
SMG8-204ENST00000580498 SLC35G3Q8N808 338 aa15.25■□□□□ 0.03
SMG8-204ENST00000580498 UBAC2Q8NBM4 344 aa15.25■□□□□ 0.03
SMG8-204ENST00000580498 SMIM4Q8WVI0 70 aa15.25■□□□□ 0.03
SMG8-204ENST00000580498 ENY2Q9NPA8 101 aa15.25■□□□□ 0.03
SMG8-204ENST00000580498 C19orf73Q9NVV2 129 aa15.25■□□□□ 0.03
SMG8-204ENST00000580498 MRPL27Q9P0M9 148 aaKnown RBP15.25■□□□□ 0.03
SMG8-204ENST00000580498 RSL24D1Q9UHA3 163 aaKnown RBP15.25■□□□□ 0.03
SMG8-204ENST00000580498 DMRT1Q9Y5R6 373 aa15.25■□□□□ 0.03
SMG8-204ENST00000580498 OR2T8A6NH00 312 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 C3orf84H3BNL1 204 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 CTDSP2O14595 271 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 CTDSPLO15194 276 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 AKAIN1P0CW23 69 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 PI3P19957 117 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 SNCAP37840 140 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 SUB1P53999 127 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMG8-204ENST00000580498 PRCDQ00LT1 54 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 RELQ04864 619 aaPredicted RBP15.24■□□□□ 0.03
SMG8-204ENST00000580498 UXS1Q8NBZ7 420 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 PRRT1Q99946 306 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 MIXL1Q9H2W2 232 aa15.24■□□□□ 0.03
SMG8-204ENST00000580498 TEX13DA0A0J9YY54 714 aaPredicted RBP15.23■□□□□ 0.03
SMG8-204ENST00000580498 IZUMO1RA6ND01 250 aa15.23■□□□□ 0.03
SMG8-204ENST00000580498 NUPL2O15504 423 aaKnown RBP15.23■□□□□ 0.03
SMG8-204ENST00000580498 SCGB2A1O75556 95 aa15.23■□□□□ 0.03
SMG8-204ENST00000580498 IFNA17P01571 189 aa15.23■□□□□ 0.03
SMG8-204ENST00000580498 CTSDP07339 412 aaPredicted RBP15.23■□□□□ 0.03
SMG8-204ENST00000580498 SURF2Q15527 256 aaPredicted RBP15.23■□□□□ 0.03
SMG8-204ENST00000580498 LAMTOR1Q6IAA8 161 aa15.23■□□□□ 0.03
SMG8-204ENST00000580498 OR13C8Q8NGS7 320 aa15.23■□□□□ 0.03
SMG8-204ENST00000580498 MISP3Q96FF7 219 aa15.23■□□□□ 0.03
SMG8-204ENST00000580498 SCGB3A2Q96PL1 93 aa15.23■□□□□ 0.03
SMG8-204ENST00000580498 TRAV25A0A0B4J276 109 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 TMEM213A2RRL7 107 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 CCDC160A6NGH7 325 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 NDUFA4O00483 81 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 MFAP4P55083 255 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 OR2C3Q8N628 320 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 OR52B4Q8NGK2 314 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 DYNC2LI1Q8TCX1 351 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 SCARB1Q8WTV0 552 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 TM2D3Q9BRN9 247 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 ZNF436Q9C0F3 470 aaPredicted RBP15.22■□□□□ 0.03
SMG8-204ENST00000580498 DAZ1Q9NQZ3 744 aaKnown RBP15.22■□□□□ 0.03
SMG8-204ENST00000580498 SCP2D1Q9UJQ7 156 aa15.22■□□□□ 0.03
SMG8-204ENST00000580498 OR11H12B2RN74 326 aa15.21■□□□□ 0.03
SMG8-204ENST00000580498 ZNF114Q8NC26 417 aa15.21■□□□□ 0.03
SMG8-204ENST00000580498 MARCH1Q8TCQ1 289 aa15.21■□□□□ 0.03
SMG8-204ENST00000580498 CACNG8Q8WXS5 425 aa15.21■□□□□ 0.03
SMG8-204ENST00000580498 TP53RKQ96S44 253 aa15.21■□□□□ 0.03
SMG8-204ENST00000580498 TXN2Q99757 166 aa15.21■□□□□ 0.03
SMG8-204ENST00000580498 THAP7Q9BT49 309 aaPredicted RBP15.21■□□□□ 0.03
SMG8-204ENST00000580498 C20orf24Q9BUV8 137 aa15.21■□□□□ 0.03
SMG8-204ENST00000580498 IGHV3-35A0A0C4DH35 117 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 CORTO00230 105 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 IGKV1-39P01597 117 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 IGKV1D-39P04432 117 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 BMI1P35226 326 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 FAUP35544 74 aaKnown RBP15.2■□□□□ 0.02
SMG8-204ENST00000580498 HOXA1P49639 335 aaPredicted RBP15.2■□□□□ 0.02
SMG8-204ENST00000580498 DHODHQ02127 395 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 TM4SF20Q53R12 229 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 BTNL8Q6UX41 500 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 ADAMTSL5Q6ZMM2 481 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 FAM219AQ8IW50 185 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 OR4D10Q8NGI6 311 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 MCFD2Q8NI22 146 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 TMEM190Q8WZ59 177 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 WDR89Q96FK6 387 aaPredicted RBP15.2■□□□□ 0.02
SMG8-204ENST00000580498 CACFD1Q9UGQ2 172 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 CEPT1Q9Y6K0 416 aa15.2■□□□□ 0.02
SMG8-204ENST00000580498 IGHV3-21A0A0B4J1V1 117 aa15.19■□□□□ 0.02
SMG8-204ENST00000580498 PIGBOS1A0A0B4J2F0 54 aa15.19■□□□□ 0.02
SMG8-204ENST00000580498 FABP12A6NFH5 140 aa15.19■□□□□ 0.02
SMG8-204ENST00000580498 ZNF785A8K8V0 405 aa15.19■□□□□ 0.02
SMG8-204ENST00000580498 UCP1P25874 307 aa15.19■□□□□ 0.02
SMG8-204ENST00000580498 TMEM61Q8N0U2 210 aa15.19■□□□□ 0.02
SMG8-204ENST00000580498 PINX1Q96BK5 328 aaKnown RBP15.19■□□□□ 0.02
SMG8-204ENST00000580498 ISOC1Q96CN7 298 aa15.19■□□□□ 0.02
SMG8-204ENST00000580498 KCNIP3Q9Y2W7 256 aa15.19■□□□□ 0.02
SMG8-204ENST00000580498 DBX1A6NMT0 343 aa15.18■□□□□ 0.02
SMG8-204ENST00000580498 H3BMQ9 156 aa15.18■□□□□ 0.02
SMG8-204ENST00000580498 K7EIM0 57 aa15.18■□□□□ 0.02
SMG8-204ENST00000580498 GNG7O60262 68 aa15.18■□□□□ 0.02
SMG8-204ENST00000580498 SCAF4O95104 1147 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms