RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PRSS46E5RG02 174 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 I3L521 148 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 ST8SIA3O43173 380 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 ADAP1O75689 374 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 DUS4LO95620 317 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 HRASP01112 189 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 IL5P05113 134 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 CRYBA1P05813 215 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 ELANEP08246 267 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 AKR1C4P17516 323 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 MAS1LP35410 378 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 RPL27AP46776 148 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 RPL23AP62750 156 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 RPL8P62917 257 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 PRCDQ00LT1 54 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 RUNX1Q01196 453 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 DEFA5Q01523 94 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 TNXAQ16473 311 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM268Q5VZI3 342 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 LYZL2Q7Z4W2 148 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 TMED4Q7Z7H5 227 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 LYG2Q86SG7 212 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 TTC9CQ8N5M4 171 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 ZNF491Q8N8L2 437 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 ZNF114Q8NC26 417 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 LFNGQ8NES3 379 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 OR5AU1Q8NGC0 362 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 VSTM2AQ8TAG5 236 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 CASTOR1Q8WTX7 329 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 CHPT1Q8WUD6 406 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 MITD1Q8WV92 249 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 P2RX4Q99571 388 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 RASL11BQ9BPW5 248 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 SRSF8Q9BRL6 282 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 SEC22CQ9BRL7 303 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 QTRT1Q9BXR0 403 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 GNB4Q9HAV0 340 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 PARP11Q9NR21 331 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 NUDT15Q9NV35 164 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 COA4Q9NYJ1 87 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 KIAA1456Q9P272 454 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 COPZ2Q9P299 210 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 HSPB7Q9UBY9 170 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 SHPKQ9UHJ6 478 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 C14orf166Q9Y224 244 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 ZNF257Q9Y2Q1 563 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 WSB1Q9Y6I7 421 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 COX11Q9Y6N1 276 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 FBN3Q75N90 2809 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 MEGF8Q7Z7M0 2845 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 TRAV6A0A075B6T7 132 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 A0A1W2PN81 502 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 H3BUA1 57 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 K7EIM0 57 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM50AO95807 157 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 PTTG1O95997 202 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 TRBV12-3P01733 135 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 HLA-AP01891 365 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 PRH1P02810 166 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 OPN1MWP04001 364 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 SERPINE2P07093 398 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 APELAP0DMC3 54 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 OPN1MW2P0DN77 364 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 OPN1MW3P0DN78 364 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 RNASE2P10153 161 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 SLC25A6P12236 298 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 VDAC1P21796 283 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 PSMB6P28072 239 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 CHRNA7P36544 502 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 CDX1P47902 265 aaPredicted RBP2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 RAB9AP51151 201 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 PAX9P55771 341 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 HSPE1P61604 102 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 GNB1P62873 340 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 OXA1LQ15070 435 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 ECSCRQ19T08 205 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 C9orf152Q5JTZ5 239 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 GGNBP1Q5YKI7 109 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 THOC7Q6I9Y2 204 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 TEPPQ6URK8 271 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 UNQ5815/PRO19632Q6UWF5 114 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 C12orf54Q6X4T0 127 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 NDUFA11Q86Y39 141 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 FAM219AQ8IW50 185 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 SGPP2Q8IWX5 399 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 LGI3Q8N145 548 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 OR2C3Q8N628 320 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 COMMD1Q8N668 190 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 C11orf44Q8N8P7 122 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 POC5Q8NA72 575 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 DMBX1Q8NFW5 382 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 OR4D5Q8NGN0 318 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 OR5M8Q8NGP6 311 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 OR5B3Q8NH48 314 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 OR52E5Q8NH55 327 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 GRPEL2Q8TAA5 225 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 ZNF431Q8TF32 576 aaPredicted RBP2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 OR10C1Q96KK4 312 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 UBE2E2Q96LR5 201 aa2.91□□□□□ -1.94
SMARCE1-215ENST00000578995 CCDC140Q96MF4 163 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms