RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 KHDC1LQ5JSQ8 128 aa9.5□□□□□ -0.89
IFT20-207ENST00000578547 HIST2H2BDQ6DRA6 164 aa9.5□□□□□ -0.89
IFT20-207ENST00000578547 LCNL1Q6ZST4 164 aa9.5□□□□□ -0.89
IFT20-207ENST00000578547 TTC9CQ8N5M4 171 aa9.5□□□□□ -0.89
IFT20-207ENST00000578547 OR5AU1Q8NGC0 362 aa9.5□□□□□ -0.89
IFT20-207ENST00000578547 OR4X2Q8NGF9 303 aa9.5□□□□□ -0.89
IFT20-207ENST00000578547 TMEM68Q96MH6 324 aa9.5□□□□□ -0.89
IFT20-207ENST00000578547 HIPK2Q9H2X6 1198 aa9.5□□□□□ -0.89
IFT20-207ENST00000578547 RCL1Q9Y2P8 373 aaKnown RBP9.5□□□□□ -0.89
IFT20-207ENST00000578547 TENM1Q9UKZ4 2725 aa9.5□□□□□ -0.89
IFT20-207ENST00000578547 A0A1B0GVG6 124 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 H3BP45 60 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 IGHG4P01861 327 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 CTRB1P17538 263 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 PPIFP30405 207 aaKnown RBP9.49□□□□□ -0.89
IFT20-207ENST00000578547 TPPP2P59282 170 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 ID3Q02535 119 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 RAB32Q13637 225 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 CTRB2Q6GPI1 263 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 TEX38Q6PEX7 206 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 TMEM65Q6PI78 240 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 OR2C3Q8N628 320 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 WFDC12Q8WWY7 111 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 P2RX4Q99571 388 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 NMES1Q9C002 83 aa9.49□□□□□ -0.89
IFT20-207ENST00000578547 ZNF436Q9C0F3 470 aaPredicted RBP9.49□□□□□ -0.89
IFT20-207ENST00000578547 PAIP2BQ9ULR5 123 aaKnown RBP9.49□□□□□ -0.89
IFT20-207ENST00000578547 K7EPK0 472 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 L7N2F9 121 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 IFNA10P01566 189 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 IGLV1-40P01703 118 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 TRGV3P03979 118 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 CRYGCP07315 174 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 CD28P10747 220 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 KRTAP10-3P60369 221 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 VAMP2P63027 116 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 CYCSP99999 105 aaKnown RBP9.48□□□□□ -0.89
IFT20-207ENST00000578547 FOXE3Q13461 319 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 SLC25A24Q6NUK1 477 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 SLC24A4Q8NFF2 622 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 CIB3Q96Q77 187 aaPredicted RBP9.48□□□□□ -0.89
IFT20-207ENST00000578547 KLK15Q9H2R5 256 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 F11RQ9Y624 299 aaKnown RBP9.48□□□□□ -0.89
IFT20-207ENST00000578547 STAB1Q9NY15 2570 aa9.48□□□□□ -0.89
IFT20-207ENST00000578547 INS-IGF2F8WCM5 200 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 CYB5BO43169 146 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 OR2J3O76001 311 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 RPLP1P05386 114 aaKnown RBP9.47□□□□□ -0.89
IFT20-207ENST00000578547 RNASE2P10153 161 aaKnown RBP9.47□□□□□ -0.89
IFT20-207ENST00000578547 NPY1RP25929 384 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 PSMB8P28062 276 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 SUB1P53999 127 aaKnown RBP eCLIP9.47□□□□□ -0.89
IFT20-207ENST00000578547 RHOGP84095 191 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 CD83Q01151 205 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 SRSF4Q08170 494 aaKnown RBP9.47□□□□□ -0.89
IFT20-207ENST00000578547 IL15RAQ13261 267 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 SPANXN5Q5MJ07 72 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 C12orf54Q6X4T0 127 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 WIPF2Q8TF74 440 aaPredicted RBP9.47□□□□□ -0.89
IFT20-207ENST00000578547 PPP1R1CQ8WVI7 109 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 MISP3Q96FF7 219 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 PSENENQ9NZ42 101 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 DMRT1Q9Y5R6 373 aa9.47□□□□□ -0.89
IFT20-207ENST00000578547 IGHV3-21A0A0B4J1V1 117 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 A0A1W2PRX2 142 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 TCRBV4S1A1TA0A5B7 111 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 H3BUA1 57 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 TMEM50AO95807 157 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 ELANEP08246 267 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 GIPP09681 153 aaPredicted RBP9.46□□□□□ -0.9
IFT20-207ENST00000578547 PVALBP20472 110 aaPredicted RBP9.46□□□□□ -0.9
IFT20-207ENST00000578547 HTR2BP41595 481 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 RAB9AP51151 201 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 MFAP2P55001 183 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 TCTEX1D4Q5JR98 221 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 COMMD1Q8N668 190 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 ZNF114Q8NC26 417 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 OR1P1Q8NH06 330 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 CHAC2Q8WUX2 184 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 PINX1Q96BK5 328 aaKnown RBP9.46□□□□□ -0.9
IFT20-207ENST00000578547 FANCD2OSQ96PS1 177 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 RAB40CQ96S21 281 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 SLA2Q9H6Q3 261 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 ZFP57Q9NU63 452 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 FBXL7Q9UJT9 491 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 S4R3C0 116 aa9.46□□□□□ -0.9
IFT20-207ENST00000578547 IGLV11-55A0A075B6I3 123 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 DEDDO75618 318 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 NDUFB8O95169 186 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 RLN2P04090 185 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 OR8U8P0C7N1 319 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 PET100P0DJ07 73 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 HIST1H1BP16401 226 aaKnown RBP9.45□□□□□ -0.9
IFT20-207ENST00000578547 BCAP31P51572 246 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 CAV2P51636 162 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 RAP2BP61225 183 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 RPL23AP62750 156 aaKnown RBP9.45□□□□□ -0.9
IFT20-207ENST00000578547 RPP30P78346 268 aaKnown RBP9.45□□□□□ -0.9
IFT20-207ENST00000578547 BSXQ3C1V8 233 aa9.45□□□□□ -0.9
IFT20-207ENST00000578547 C2orf83Q53S99 150 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms