RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 DTD1Q8TEA8 209 aa10.84□□□□□ -0.67
LINC01543-201ENST00000578367 UBE2E2Q96LR5 201 aa10.84□□□□□ -0.67
LINC01543-201ENST00000578367 NMES1Q9C002 83 aa10.84□□□□□ -0.67
LINC01543-201ENST00000578367 TSSC4Q9Y5U2 329 aaPredicted RBP10.84□□□□□ -0.67
LINC01543-201ENST00000578367 F11RQ9Y624 299 aaKnown RBP10.84□□□□□ -0.67
LINC01543-201ENST00000578367 U3KQ87 197 aa10.84□□□□□ -0.67
LINC01543-201ENST00000578367 COL6A5A8TX70 2615 aa10.84□□□□□ -0.67
LINC01543-201ENST00000578367 CEBPZOSA8MTT3 80 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 CORTO00230 105 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 SYNGR2O43760 224 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 SOX15O60248 233 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 DEFA4P12838 97 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 AREGP15514 252 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 SNCAP37840 140 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 CDX1P47902 265 aaPredicted RBP10.83□□□□□ -0.68
LINC01543-201ENST00000578367 TAS2R30P59541 319 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 BSXQ3C1V8 233 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 PVRIGQ6DKI7 326 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 NDUFA11Q86Y39 141 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 OR5T1Q8NG75 326 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 OR10W1Q8NGF6 305 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 SPATA3Q8NHX4 192 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 OR10C1Q96KK4 312 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 RAB40CQ96S21 281 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 ATP6V0BQ99437 205 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 MED28Q9H204 178 aa10.83□□□□□ -0.68
LINC01543-201ENST00000578367 C13orf42A0A1B0GVH6 325 aa10.82□□□□□ -0.68
LINC01543-201ENST00000578367 MPTX1A8MV57 137 aa10.82□□□□□ -0.68
LINC01543-201ENST00000578367 WRBO00258 174 aa10.82□□□□□ -0.68
LINC01543-201ENST00000578367 PF4V1P10720 104 aa10.82□□□□□ -0.68
LINC01543-201ENST00000578367 RUNX1Q01196 453 aa10.82□□□□□ -0.68
LINC01543-201ENST00000578367 SRSF4Q08170 494 aaKnown RBP10.82□□□□□ -0.68
LINC01543-201ENST00000578367 IL15RAQ13261 267 aa10.82□□□□□ -0.68
LINC01543-201ENST00000578367 C2orf83Q53S99 150 aa10.82□□□□□ -0.68
LINC01543-201ENST00000578367 MDFIQ99750 246 aa10.82□□□□□ -0.68
LINC01543-201ENST00000578367 HEYLQ9NQ87 328 aaPredicted RBP10.82□□□□□ -0.68
LINC01543-201ENST00000578367 IGLV11-55A0A075B6I3 123 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 TCRBV4S1A1TA0A5B7 111 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 FAM25EA8MYX2 175 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 GOSR2O14653 212 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 SCAF4O95104 1147 aaKnown RBP10.81□□□□□ -0.68
LINC01543-201ENST00000578367 TRGV3P03979 118 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 RPL23AP62750 156 aaKnown RBP10.81□□□□□ -0.68
LINC01543-201ENST00000578367 EXOSC2Q13868 293 aaKnown RBP10.81□□□□□ -0.68
LINC01543-201ENST00000578367 TCTEX1D4Q5JR98 221 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 ZNF491Q8N8L2 437 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 VN1R17PQ8TDU5 208 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 CXorf58Q96LI9 332 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 FANCD2OSQ96PS1 177 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 P2RX4Q99571 388 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 RBKSQ9H477 322 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 ZNF355PQ9NSJ1 428 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 GSKIPQ9P0R6 139 aa10.81□□□□□ -0.68
LINC01543-201ENST00000578367 CCSO14618 274 aa10.8□□□□□ -0.68
LINC01543-201ENST00000578367 CD28P10747 220 aa10.8□□□□□ -0.68
LINC01543-201ENST00000578367 TPPP2P59282 170 aa10.8□□□□□ -0.68
LINC01543-201ENST00000578367 RRAS2P62070 204 aaPredicted RBP10.8□□□□□ -0.68
LINC01543-201ENST00000578367 KIAA0141Q14154 515 aaPredicted RBP10.8□□□□□ -0.68
LINC01543-201ENST00000578367 SLC24A4Q8NFF2 622 aa10.8□□□□□ -0.68
LINC01543-201ENST00000578367 RNASEH2CQ8TDP1 164 aaKnown RBP10.8□□□□□ -0.68
LINC01543-201ENST00000578367 C4orf3Q8WVX3 66 aa10.8□□□□□ -0.68
LINC01543-201ENST00000578367 SMIM8Q96KF7 97 aa10.8□□□□□ -0.68
LINC01543-201ENST00000578367 MGAT4CQ9UBM8 478 aa10.8□□□□□ -0.68
LINC01543-201ENST00000578367 PLXNB1O43157 2135 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 MBPP02686 304 aaPredicted RBP10.79□□□□□ -0.68
LINC01543-201ENST00000578367 RLN2P04090 185 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 RPLP1P05386 114 aaKnown RBP10.79□□□□□ -0.68
LINC01543-201ENST00000578367 PET100P0DJ07 73 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 APELAP0DMC3 54 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 RNASE2P10153 161 aaKnown RBP10.79□□□□□ -0.68
LINC01543-201ENST00000578367 PVALBP20472 110 aaPredicted RBP10.79□□□□□ -0.68
LINC01543-201ENST00000578367 KRTAP10-3P60369 221 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 RHOGP84095 191 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 ATP5G2Q06055 141 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 C2orf68Q2NKX9 166 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 SLC25A24Q6NUK1 477 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 C10orf99Q6UWK7 81 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 Q6ZNX1 250 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 CITED2Q99967 270 aaPredicted RBP10.79□□□□□ -0.68
LINC01543-201ENST00000578367 KLK15Q9H2R5 256 aa10.79□□□□□ -0.68
LINC01543-201ENST00000578367 GAR1Q9NY12 217 aaKnown RBP10.79□□□□□ -0.68
LINC01543-201ENST00000578367 TRBV7-1A0A0A6YYK4 115 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 RPS10-NUDT3A0A1W2PQS6 291 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 TSC22D2O75157 780 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 IFNA10P01566 189 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 REG1AP05451 166 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 NPY1RP25929 384 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 FCGR2BP31994 310 aaPredicted RBP10.78□□□□□ -0.68
LINC01543-201ENST00000578367 H2BFSP57053 126 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 POLR2GP62487 172 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC01543-201ENST00000578367 RAB11AP62491 216 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 SPINK9Q5DT21 86 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 ETFRF1Q6IPR1 90 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 ZNF343Q6P1L6 599 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 MS4A10Q96PG2 267 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 TXN2Q99757 166 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 FBXL7Q9UJT9 491 aa10.78□□□□□ -0.68
LINC01543-201ENST00000578367 K7EPK0 472 aa10.77□□□□□ -0.69
LINC01543-201ENST00000578367 LGALS1P09382 135 aaKnown RBP10.77□□□□□ -0.69
LINC01543-201ENST00000578367 GIPP09681 153 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms