RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 PRSS3P2Q8NHM4 247 aa3.83□□□□□ -1.8
NF1-218ENST00000577967 CLDND2Q8NHS1 167 aa3.83□□□□□ -1.8
NF1-218ENST00000577967 RNF166Q96A37 237 aaPredicted RBP3.83□□□□□ -1.8
NF1-218ENST00000577967 CYTL1Q9NRR1 136 aa3.83□□□□□ -1.8
NF1-218ENST00000577967 RPRMQ9NS64 109 aa3.83□□□□□ -1.8
NF1-218ENST00000577967 TRBV6-6A0A0A6YYG2 114 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 H0YJW9 148 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 IGHV3-11P01762 117 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 SELENOTP62341 195 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 RELQ04864 619 aaPredicted RBP3.82□□□□□ -1.8
NF1-218ENST00000577967 KRTAP27-1Q3LI81 207 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 TM4SF20Q53R12 229 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 SP5Q6BEB4 398 aaPredicted RBP3.82□□□□□ -1.8
NF1-218ENST00000577967 IGFL2Q6UWQ7 119 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 SLC25A48Q6ZT89 311 aaKnown RBP3.82□□□□□ -1.8
NF1-218ENST00000577967 DUX5Q96PT3 197 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 PARLQ9H300 379 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 LINC00527Q9UJ94 153 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 A0A0G2JRQ6 117 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 SEC14L6B5MCN3 397 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 BUB1B-PAK6H3BSN5 160 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 IGLV3-1P01715 115 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 GNG5P63218 68 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 RIGQ13278 110 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 ZNF506Q5JVG8 444 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 DNM1P46Q6ZS02 220 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 IFT22Q9H7X7 185 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 AP4M1O00189 453 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 IGLV1-44P01699 117 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 C3orf36Q3SXR2 165 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 C10orf55Q5SWW7 151 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 RUSC1-AS1Q66K80 236 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 BRD3OSQ6XYD6 125 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 BPIFA4PQ86YQ2 179 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 ZNF383Q8NA42 475 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 C1orf147Q96MC9 270 aaPredicted RBP3.82□□□□□ -1.8
NF1-218ENST00000577967 GGACTQ9BVM4 153 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 PITPNC1Q9UKF7 332 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 RP1P56715 2156 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 SIAH2O43255 324 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 PRB1P04280 392 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 MAS1LP35410 378 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 PRCDQ00LT1 54 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 IGF2-ASQ6U949 168 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 TOMM20LQ6UXN7 152 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 TEX45Q8NA69 505 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 CYYR1Q96J86 154 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 PRO1933Q9H354 126 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 RPUSD1Q9UJJ7 312 aaKnown RBP3.82□□□□□ -1.8
NF1-218ENST00000577967 SRCAPQ6ZRS2 3230 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 TP53BP1Q12888 1972 aaPredicted RBP3.82□□□□□ -1.8
NF1-218ENST00000577967 IGHV3OR16-12A0A075B7B8 117 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 TRAV5A0A0B4J249 113 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 TMEM8BA6NDV4 472 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 RBFOX2O43251 390 aaKnown RBP eCLIP3.82□□□□□ -1.8
NF1-218ENST00000577967 IGKV3-20P01619 116 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 RNF224P0DH78 156 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 CRISP2P16562 243 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 NPPCP23582 126 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 CNTFRP26992 372 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 PAFAH1B2P68402 229 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 FAM162BQ5T6X4 162 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 GOLT1AQ6ZVE7 132 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 KIR3DL3Q8N743 410 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 LRTM2Q8N967 370 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 SGMS2Q8NHU3 365 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 RNASEH2CQ8TDP1 164 aaKnown RBP3.82□□□□□ -1.8
NF1-218ENST00000577967 FGF23Q9GZV9 251 aaPredicted RBP3.82□□□□□ -1.8
NF1-218ENST00000577967 HSPB7Q9UBY9 170 aa3.82□□□□□ -1.8
NF1-218ENST00000577967 A0A1W2PS18 150 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 HSBP1O75506 76 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 TRGC2P03986 189 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 VDAC2P45880 294 aaPredicted RBP3.81□□□□□ -1.8
NF1-218ENST00000577967 CCL20P78556 96 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 ID3Q02535 119 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 ICAM4Q14773 271 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 C17orf58Q2M2W7 97 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 FAM106AQ4KMX7 169 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 CENPWQ5EE01 88 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 TMEM78Q5T7P6 136 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 SPATA31B1PQ5VZV4 182 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 EBLN2Q6P2I7 272 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 MAPK1IP1LQ8NDC0 245 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 SFRP2Q96HF1 295 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 LIME1Q9H400 295 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 GSX1Q9H4S2 264 aaPredicted RBP3.81□□□□□ -1.8
NF1-218ENST00000577967 ELOA3CA0A087WX78 387 aaPredicted RBP3.81□□□□□ -1.8
NF1-218ENST00000577967 A6NNC1 897 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 FAM90A9PA6NNJ1 464 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 HLA-DRB1P01911 266 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 COMPP49747 757 aaPredicted RBP3.81□□□□□ -1.8
NF1-218ENST00000577967 DLX6P56179 175 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 BPESC1Q9GZL8 116 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 BET1LQ9NYM9 111 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 FOXI3A8MTJ6 420 aaPredicted RBP3.81□□□□□ -1.8
NF1-218ENST00000577967 PHOX2AO14813 284 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 SRP19P09132 144 aaKnown RBP3.81□□□□□ -1.8
NF1-218ENST00000577967 TMEM177Q53S58 311 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 HEPN1Q6WQI6 88 aa3.81□□□□□ -1.8
NF1-218ENST00000577967 SRSF12Q8WXF0 261 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms