RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ST8SIA3O43173 380 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 PRH1P02810 166 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 RLN2P04090 185 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 MC5RP33032 325 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 P2RY1P47900 373 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 OR2B8PP59922 312 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 S100A10P60903 97 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 CATR1Q13166 79 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 TNXAQ16473 311 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 SHISA2Q6UWI4 295 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 Q6ZRM9 215 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 CENPVQ7Z7K6 275 aaPredicted RBP6.18□□□□□ -1.42
CCDC40-215ENST00000576033 FAM219AQ8IW50 185 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 OR4S2Q8NH73 311 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 FAM110DQ8TAY7 271 aaPredicted RBP6.18□□□□□ -1.42
CCDC40-215ENST00000576033 SCARB1Q8WTV0 552 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 ARPC1AQ92747 370 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 OR5B12Q96R08 314 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 TSNAXQ99598 290 aaKnown RBP6.18□□□□□ -1.42
CCDC40-215ENST00000576033 ARPC5LQ9BPX5 153 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 ARV1Q9H2C2 271 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 MED9Q9NWA0 146 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 NOTCH1P46531 2555 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 TRAV41A0A0B4J266 112 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 A0A1W2PN81 502 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 AP4M1O00189 453 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 KCNAB3O43448 404 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 KBTBD11O94819 623 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 SPDEFO95238 335 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 TMEM50AO95807 157 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 REG1AP05451 166 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 SERPINE2P07093 398 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 NMBP08949 121 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 OR9G9P0C7N8 305 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 RPL12P30050 165 aaKnown RBP6.17□□□□□ -1.42
CCDC40-215ENST00000576033 PPIFP30405 207 aaKnown RBP6.17□□□□□ -1.42
CCDC40-215ENST00000576033 G6PCP35575 357 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 CHRNA7P36544 502 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 LPAR6P43657 344 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 NKX2-1P43699 371 aaPredicted RBP6.17□□□□□ -1.42
CCDC40-215ENST00000576033 AP2S1P53680 142 aaPredicted RBP6.17□□□□□ -1.42
CCDC40-215ENST00000576033 UBE2KP61086 200 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 SMCO1Q147U7 214 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 FXYD3Q14802 87 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 PRSS8Q16651 343 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 CXorf66Q5JRM2 361 aaPredicted RBP6.17□□□□□ -1.42
CCDC40-215ENST00000576033 OR4A47Q6IF82 309 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 ETV3LQ6ZN32 361 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 C8orf86Q6ZUL3 223 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 PPP1R27Q86WC6 154 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 FOXRED2Q8IWF2 684 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 SLC7A5P1Q8MH63 180 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 PUSL1Q8N0Z8 303 aaKnown RBP6.17□□□□□ -1.42
CCDC40-215ENST00000576033 LFNGQ8NES3 379 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 CD300LFQ8TDQ1 290 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 ADTRPQ96IZ2 230 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 MS4A10Q96PG2 267 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 GNB4Q9HAV0 340 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 TMEM140Q9NV12 185 aa6.17□□□□□ -1.42
CCDC40-215ENST00000576033 LSM5Q9Y4Y9 91 aaKnown RBP6.17□□□□□ -1.42
CCDC40-215ENST00000576033 TCRBV4S1A1TA0A5B7 111 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 TEX22C9J3V5 150 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 FAM90A26D6RGX4 464 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 KRASP01116 189 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 IGF1P05019 195 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 KIR2DS2P43631 304 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 PAX9P55771 341 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 KIAA0141Q14154 515 aaPredicted RBP6.16□□□□□ -1.42
CCDC40-215ENST00000576033 POU2AF1Q16633 256 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 VMA21Q3ZAQ7 101 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 SPINK9Q5DT21 86 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 THOC7Q6I9Y2 204 aaKnown RBP6.16□□□□□ -1.42
CCDC40-215ENST00000576033 UNQ5815/PRO19632Q6UWF5 114 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 OR5T1Q8NG75 326 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 OSR1Q8TAX0 266 aaPredicted RBP6.16□□□□□ -1.42
CCDC40-215ENST00000576033 SRSF12Q8WXF0 261 aaKnown RBP6.16□□□□□ -1.42
CCDC40-215ENST00000576033 R3HDM4Q96D70 268 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 LYRM2Q9NU23 88 aaPredicted RBP6.16□□□□□ -1.42
CCDC40-215ENST00000576033 CACNG5Q9UF02 275 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 PRELID3BQ9Y3B1 194 aa6.16□□□□□ -1.42
CCDC40-215ENST00000576033 MARCH11A6NNE9 402 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 ATG12O94817 140 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 NXPH3O95157 252 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 CNIH1O95406 144 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 SCGB1D2O95969 90 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 IGHV3-11P01762 117 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 IGHG4P01861 327 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 IL6RP08887 468 aaPredicted RBP6.15□□□□□ -1.42
CCDC40-215ENST00000576033 RRASP10301 218 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 PF4V1P10720 104 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 TPT1P13693 172 aaKnown RBP6.15□□□□□ -1.42
CCDC40-215ENST00000576033 AREGP15514 252 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 PSMB8P28062 276 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 NUP62P37198 522 aaPredicted RBP6.15□□□□□ -1.42
CCDC40-215ENST00000576033 CRIP2P52943 208 aaPredicted RBP6.15□□□□□ -1.42
CCDC40-215ENST00000576033 TAS2R30P59541 319 aa6.15□□□□□ -1.42
CCDC40-215ENST00000576033 POLR2GP62487 172 aaKnown RBP eCLIP6.15□□□□□ -1.42
CCDC40-215ENST00000576033 RPL23AP62750 156 aaKnown RBP6.15□□□□□ -1.42
CCDC40-215ENST00000576033 PDLIM3Q53GG5 364 aaPredicted RBP6.15□□□□□ -1.42
CCDC40-215ENST00000576033 ALKAL2Q6UX46 152 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms