RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CXorf58Q96LI9 332 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 C20orf85Q9H1P6 137 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 CACNG5Q9UF02 275 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 FBXL7Q9UJT9 491 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 VWFP04275 2813 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 DBX1A6NMT0 343 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 ST8SIA3O43173 380 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 TCRBP04435 133 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 OR4E1P0C645 316 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 ZP3P21754 424 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 SNCAP37840 140 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 HOXA1P49639 335 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 SUB1P53999 127 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 SPCS3P61009 180 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 WT1-ASQ06250 92 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 FHL3Q13643 280 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 EXOSC2Q13868 293 aaKnown RBP9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 KLK9Q2XQG4 91 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 SLC25A24Q6NUK1 477 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 ZNF343Q6P1L6 599 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 LRTM2Q8N967 370 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 EEF1AKMT3Q96AZ1 226 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 GPR146Q96CH1 333 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 DUX3Q96PT4 197 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 ALX4Q9H161 411 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 PEF1Q9UBV8 284 aaKnown RBP9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 KLK9Q9UKQ9 250 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 FLVCR2Q9UPI3 526 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 TMED3Q9Y3Q3 217 aa9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 F11RQ9Y624 299 aaKnown RBP9.88□□□□□ -0.83
TRAPPC1-206ENST00000573989 IGLV11-55A0A075B6I3 123 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 TRBV7-1A0A0A6YYK4 115 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 A0A0G2JRQ6 117 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 A0A1B0GU03 582 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 C9orf170A2RU37 121 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 ANKRD34BA5PLL1 514 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 DHRS2Q13268 280 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 SMCO1Q147U7 214 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 TATDN3Q17R31 274 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 LYZL2Q7Z4W2 148 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 LYG2Q86SG7 212 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 OR2C3Q8N628 320 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 OR1P1Q8NH06 330 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 ENKURQ8TC29 256 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 FANCD2OSQ96PS1 177 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 NUDT15Q9NV35 164 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 PRR13Q9NZ81 148 aa9.87□□□□□ -0.83
TRAPPC1-206ENST00000573989 IGHV4OR15-8A0A075B7B6 117 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 A0A087WW49 117 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 INS-IGF2F8WCM5 200 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 IFNA21P01568 189 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 SLC25A6P12236 298 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 ANXA7P20073 488 aaKnown RBP9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 DEFA5Q01523 94 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 ANKRD55Q3KP44 614 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 AARDQ4LEZ3 155 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 NMSQ5H8A3 153 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 Q6ZRM9 215 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 ZNF114Q8NC26 417 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 OR1S1Q8NH92 325 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 HIPK2Q9H2X6 1198 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 TBC1D24Q9ULP9 559 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 NOTCH3Q9UM47 2321 aa9.86□□□□□ -0.83
TRAPPC1-206ENST00000573989 TRAV6A0A075B6T7 132 aa9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 CEBPZOSA8MTT3 80 aa9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 NDUFB8O95169 186 aa9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 H2AFB2P0C5Z0 115 aa9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 RPEL1Q2QD12 228 aa9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 PDLIM3Q53GG5 364 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 SPINK9Q5DT21 86 aa9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 C19orf35Q6ZS72 473 aa9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 VN1R17PQ8TDU5 208 aa9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 HEYLQ9NQ87 328 aaPredicted RBP9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 ZMAT5Q9UDW3 170 aaKnown RBP9.85□□□□□ -0.83
TRAPPC1-206ENST00000573989 CORTO00230 105 aa9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 OVOL1O14753 267 aa9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 HOXB5P09067 269 aa9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 IGLL1P15814 213 aa9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 HOXD3P31249 432 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 HTR2BP41595 481 aa9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 C9orf66Q5T8R8 295 aa9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 NOXA1Q86UR1 476 aa9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 ATP6V0BQ99437 205 aa9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 ELOVL1Q9BW60 279 aa9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 GAR1Q9NY12 217 aaKnown RBP9.84□□□□□ -0.83
TRAPPC1-206ENST00000573989 FAM90A26D6RGX4 464 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 GGCTO75223 188 aaKnown RBP9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 MED6O75586 246 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 INSL3P51460 131 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 SLURP1P55000 103 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 TNFRSF9Q07011 255 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 SAMD5Q5TGI4 173 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 GGNBP1Q5YKI7 109 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 CLEC19AQ6UXS0 136 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 DCUN1D4Q92564 292 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 DLX4Q92988 240 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 MISP3Q96FF7 219 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 HSPB7Q9UBY9 170 aa9.83□□□□□ -0.84
TRAPPC1-206ENST00000573989 NBEAL1Q6ZS30 2694 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms