RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 COMPP49747 757 aaPredicted RBP6.11□□□□□ -1.43
CDH13-214ENST00000569455 DLK1P80370 383 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 HNF4GQ14541 408 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 RUSC1-AS1Q66K80 236 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 ETV3LQ6ZN32 361 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 HAPLN4Q86UW8 402 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 CIARTQ8N365 385 aaPredicted RBP6.11□□□□□ -1.43
CDH13-214ENST00000569455 PIP4P2Q8N4L2 257 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 Q8N6K4 173 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 HSD17B11Q8NBQ5 300 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 RNF141Q8WVD5 230 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 C17orf50Q8WW18 174 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 TMED6Q8WW62 240 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 RBMXL1Q96E39 390 aaKnown RBP6.11□□□□□ -1.43
CDH13-214ENST00000569455 SRSF8Q9BRL6 282 aaKnown RBP6.11□□□□□ -1.43
CDH13-214ENST00000569455 GGACTQ9BVM4 153 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 PARD6GQ9BYG4 376 aaPredicted RBP6.11□□□□□ -1.43
CDH13-214ENST00000569455 UQCC1Q9NVA1 299 aa6.11□□□□□ -1.43
CDH13-214ENST00000569455 IGHV3OR16-10A0A075B7F0 116 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 NCBP2LA6PVI3 153 aaKnown RBP6.1□□□□□ -1.43
CDH13-214ENST00000569455 PMS2P5A8MQ11 134 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 WIPF1O43516 503 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 FBXO24O75426 580 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 TSPAN9O75954 239 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 CNIH1O95406 144 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 CA2P00918 260 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 IGHV4-38-2P0DP08 117 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 SPP1P10451 314 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 CD24P25063 80 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 RAB5CP51148 216 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 GNB1P62873 340 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 ARL16Q0P5N6 197 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 PJVKQ0ZLH3 352 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 C5orf64Q2M2E5 130 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 C2orf83Q53S99 150 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 BRD3OSQ6XYD6 125 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 AJUBAQ96IF1 538 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 MEGF9Q9H1U4 602 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 TPSG1Q9NRR2 321 aa6.1□□□□□ -1.43
CDH13-214ENST00000569455 ANK3Q12955 4377 aaKnown RBP6.09□□□□□ -1.43
CDH13-214ENST00000569455 A0A0U1RQK1 487 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 UBE2L5PA0A1B0GUS4 154 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 RPS10-NUDT3A0A1W2PQS6 291 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 UMAD1C9J7I0 102 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 FNDC10F2Z333 226 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 C17orf112F2Z3M2 114 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 SMAD7O15105 426 aaKnown RBP6.09□□□□□ -1.43
CDH13-214ENST00000569455 PLXNB1O43157 2135 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 SOX15O60248 233 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 MPDU1O75352 247 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 NMBP08949 121 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 OR13C7P0DN81 318 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 RNASE2P10153 161 aaKnown RBP6.09□□□□□ -1.43
CDH13-214ENST00000569455 PAX6P26367 422 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 ATP6V0CP27449 155 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 SULT1A2P50226 295 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 BLOC1S1P78537 153 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 SCGB2A2Q13296 93 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 AANATQ16613 207 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 MRGPRG-AS1Q2M3A8 158 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 VWC2Q2TAL6 325 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 LRRC75BQ2VPJ9 315 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 BSXQ3C1V8 233 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 FAM74A1Q5RGS3 127 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 C10orf55Q5SWW7 151 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 ZNF709Q8N972 641 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 MAPK1IP1LQ8NDC0 245 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 OR10W1Q8NGF6 305 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 OR2G3Q8NGZ4 309 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 NANPQ8TBE9 248 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 ABHD5Q8WTS1 349 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 SRSF12Q8WXF0 261 aaKnown RBP6.09□□□□□ -1.43
CDH13-214ENST00000569455 SAT2Q96F10 170 aaPredicted RBP6.09□□□□□ -1.43
CDH13-214ENST00000569455 RASL11BQ9BPW5 248 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 PSMG3Q9BT73 122 aaPredicted RBP6.09□□□□□ -1.43
CDH13-214ENST00000569455 WDR61Q9GZS3 305 aaKnown RBP6.09□□□□□ -1.43
CDH13-214ENST00000569455 TIMM9Q9Y5J7 89 aa6.09□□□□□ -1.43
CDH13-214ENST00000569455 IGLC7A0M8Q6 106 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 SMCO3A2RU48 225 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 LINC00862A6NCI5 91 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 CGB1A6NKQ9 187 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 ZNF705EA8MWA4 302 aaPredicted RBP6.08□□□□□ -1.44
CDH13-214ENST00000569455 E7EUB6 86 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 TRIM77I1YAP6 450 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 CORTO00230 105 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 CYB5BO43169 146 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 FGF16O43320 207 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 LY6G6DO95868 133 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 AVPP01185 164 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 PRH1P02810 166 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 HNF1AP20823 631 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 FGF7P21781 194 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 GPX4P36969 197 aaPredicted RBP6.08□□□□□ -1.44
CDH13-214ENST00000569455 SERF2P84101 59 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 WT1-ASQ06250 92 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 KRTAP1-1Q07627 177 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 RAB31Q13636 194 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 FXYD3Q14802 87 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 TUSC1Q2TAM9 212 aa6.08□□□□□ -1.44
CDH13-214ENST00000569455 KLF17Q5JT82 389 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms