RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	HLA-G	P17693	338 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	CEL	P19835	753 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	ATP5G3	P48201	142 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	RPL8	P62917	257 aa	Known RBP	4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	YIF1B	Q5BJH7	314 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	MZT2A	Q6P582	158 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	CDH26	Q8IXH8	852 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	C1orf158	Q8N1D5	194 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	GDPD1	Q8N9F7	314 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	UBAC2	Q8NBM4	344 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	GPR148	Q8TDV2	347 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	ORAI1	Q96D31	301 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	UQCC2	Q9BRT2	126 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	DCUN1D5	Q9BTE7	237 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	NXF2	Q9GZY0	626 aa	Known RBP	4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	TAGLN3	Q9UI15	199 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	MGAT4A	Q9UM21	535 aa		4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	EXOG	Q9Y2C4	368 aa	Known RBP	4.18	□□□□□ -1.74
BBS4-218	ENST00000569440	LRCOL1	A6NCL2	159 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	RAB27B	O00194	218 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	FAM107A	O95990	144 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	EIF4E	P06730	217 aa	Known RBP	4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	SERPINE2	P07093	398 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	CD3G	P09693	182 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	DEFB130B	P0DP73	79 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	DEFB130A	P0DP74	79 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	SRM	P19623	302 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	HTR2C	P28335	458 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	SERPINB10	P48595	397 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	HOXA1	P49639	335 aa	Predicted RBP	4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	DAP	P51397	102 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	UCP3	P55916	312 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	BRWD1-AS2	P59051	145 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	RPL30	P62888	115 aa	Known RBP	4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	RRN3P1	Q2M238	152 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440		Q56UQ5	140 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	PSMG4	Q5JS54	123 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	OR2G6	Q5TZ20	316 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	AWAT2	Q6E213	333 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	SLC25A24	Q6NUK1	477 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	ZNF773	Q6PK81	442 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	TOMM20L	Q6UXN7	152 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	SYS1	Q8N2H4	156 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	ACBD7	Q8N6N7	88 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	ZNF709	Q8N972	641 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	STXBP6	Q8NFX7	210 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	RXFP4	Q8TDU9	374 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	ANP32B	Q92688	251 aa	Known RBP	4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	CMTM5	Q96DZ9	223 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	DAZAP1	Q96EP5	407 aa	Known RBP	4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	ARPC5L	Q9BPX5	153 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	GINS3	Q9BRX5	216 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	IMPAD1	Q9NX62	359 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	GHRL	Q9UBU3	117 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	RAB21	Q9UL25	225 aa		4.17	□□□□□ -1.74
BBS4-218	ENST00000569440	LPA	P08519	4548 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	TRAV8-7	A0A075B6U6	113 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	TRBV6-7	A0A0A0MS04	114 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	TRDC	B7Z8K6	153 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	GNGT2	O14610	69 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	SIVA1	O15304	175 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	CYB5B	O43169	146 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	HLA-DRB4	P13762	266 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	CRHBP	P24387	322 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	MNAT1	P51948	309 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	FXYD7	P58549	80 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	MRPL28	Q13084	256 aa	Known RBP	4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	RBM48	Q5RL73	367 aa	Known RBP	4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	OR10K2	Q6IF99	312 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	SCX	Q7RTU7	201 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	JAGN1	Q8N5M9	183 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	OR10W1	Q8NGF6	305 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	RFK	Q969G6	155 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	TXN2	Q99757	166 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	TMEM231	Q9H6L2	316 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	FGFR1OP2	Q9NVK5	253 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	AK3	Q9UIJ7	227 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	SLC45A2	Q9UMX9	530 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	GOLT1B	Q9Y3E0	138 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	HLA-DRB4	X5D2U9	266 aa		4.16	□□□□□ -1.74
BBS4-218	ENST00000569440	TRAV26-1	A0A087WT03	109 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	TRAV3	A0A0B4J244	114 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440		A0A0U1RQV1	116 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	PLAC8L1	A1L4L8	177 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	HELT	A6NFD8	242 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	DIRAS3	O95661	229 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	PRDX6	P30041	224 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	GTF2A1	P52655	376 aa	Predicted RBP	4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	WT1-AS	Q06250	92 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	FCN2	Q15485	313 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	SSX1	Q16384	188 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	KCTD21	Q4G0X4	260 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	IGSF11	Q5DX21	431 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	SPART	Q8N0X7	666 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440		Q8N814	137 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	OR4A4P	Q8NGN8	299 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	OR8J1	Q8NGP2	316 aa		4.15	□□□□□ -1.75
BBS4-218	ENST00000569440	FCGR1B	Q92637	280 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms