RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 PRH1P02810 166 aa12.26□□□□□ -0.45
SPG7-218ENST00000568205 ID3Q02535 119 aa12.26□□□□□ -0.45
SPG7-218ENST00000568205 TMEM65Q6PI78 240 aa12.26□□□□□ -0.45
SPG7-218ENST00000568205 LCNL1Q6ZST4 164 aa12.26□□□□□ -0.45
SPG7-218ENST00000568205 DTD1Q8TEA8 209 aa12.26□□□□□ -0.45
SPG7-218ENST00000568205 MS4A10Q96PG2 267 aa12.26□□□□□ -0.45
SPG7-218ENST00000568205 ZNF747Q9BV97 191 aa12.26□□□□□ -0.45
SPG7-218ENST00000568205 MAGT1Q9H0U3 335 aa12.26□□□□□ -0.45
SPG7-218ENST00000568205 HEYLQ9NQ87 328 aaPredicted RBP12.26□□□□□ -0.45
SPG7-218ENST00000568205 F11RQ9Y624 299 aaKnown RBP12.26□□□□□ -0.45
SPG7-218ENST00000568205 SCGB1D2O95969 90 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 TRGV3P03979 118 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 RPLP1P05386 114 aaKnown RBP12.25□□□□□ -0.45
SPG7-218ENST00000568205 DEFA4P12838 97 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 RAB9AP51151 201 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 CD83Q01151 205 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 SRSF4Q08170 494 aaKnown RBP12.25□□□□□ -0.45
SPG7-218ENST00000568205 FCN2Q15485 313 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 C11orf87Q6NUJ2 197 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 C3orf56Q8N813 242 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 ZNF114Q8NC26 417 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 P2RX4Q99571 388 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 SLA2Q9H6Q3 261 aa12.25□□□□□ -0.45
SPG7-218ENST00000568205 TCRBV4S1A1TA0A5B7 111 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 WRBO00258 174 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 SYNGR2O43760 224 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 MBPP02686 304 aaPredicted RBP12.24□□□□□ -0.45
SPG7-218ENST00000568205 IAPPP10997 89 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 HIST1H1BP16401 226 aaKnown RBP12.24□□□□□ -0.45
SPG7-218ENST00000568205 SNCAP37840 140 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 H2BFSP57053 126 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 TPPP2P59282 170 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 POLR2GP62487 172 aaKnown RBP eCLIP12.24□□□□□ -0.45
SPG7-218ENST00000568205 IL15RAQ13261 267 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 KLK9Q2XQG4 91 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 HIST2H2BDQ6DRA6 164 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 Q6ZNX1 250 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 OR1P1Q8NH06 330 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 MYOZ3Q8TDC0 251 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 CITED1Q99966 193 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 CITED2Q99967 270 aaPredicted RBP12.24□□□□□ -0.45
SPG7-218ENST00000568205 HIPK2Q9H2X6 1198 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 KLK9Q9UKQ9 250 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 DMRT1Q9Y5R6 373 aa12.24□□□□□ -0.45
SPG7-218ENST00000568205 IGLV11-55A0A075B6I3 123 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 TRBV9A0A0B4J1U6 114 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 CYB5BO43169 146 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 RNASE2P10153 161 aaKnown RBP12.23□□□□□ -0.45
SPG7-218ENST00000568205 CXCL3P19876 107 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 MFAP2P55001 183 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 RRAS2P62070 204 aaPredicted RBP12.23□□□□□ -0.45
SPG7-218ENST00000568205 RHOGP84095 191 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 CYCSP99999 105 aaKnown RBP12.23□□□□□ -0.45
SPG7-218ENST00000568205 KIAA0141Q14154 515 aaPredicted RBP12.23□□□□□ -0.45
SPG7-218ENST00000568205 BSXQ3C1V8 233 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 KHDC1LQ5JSQ8 128 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 NECAP1Q8NC96 275 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 SLC24A4Q8NFF2 622 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 OR11H7Q8NGC8 314 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 OR1L6Q8NGR2 347 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 CIB3Q96Q77 187 aaPredicted RBP12.23□□□□□ -0.45
SPG7-218ENST00000568205 NMES1Q9C002 83 aa12.23□□□□□ -0.45
SPG7-218ENST00000568205 FAM223BA6NKX1 122 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 SSSCA1O60232 199 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 OR2J3O76001 311 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 LY86O95711 162 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 HTR2BP41595 481 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 SUB1P53999 127 aaKnown RBP eCLIP12.22□□□□□ -0.45
SPG7-218ENST00000568205 RPL23AP62750 156 aaKnown RBP12.22□□□□□ -0.45
SPG7-218ENST00000568205 DEFA5Q01523 94 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 SLC25A24Q6NUK1 477 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 FAM223AQ8IWN6 122 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 ZNF491Q8N8L2 437 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 ZFP57Q9NU63 452 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 RCL1Q9Y2P8 373 aaKnown RBP12.22□□□□□ -0.45
SPG7-218ENST00000568205 TSSC4Q9Y5U2 329 aaPredicted RBP12.22□□□□□ -0.45
SPG7-218ENST00000568205 U3KQ87 197 aa12.22□□□□□ -0.45
SPG7-218ENST00000568205 TET2Q6N021 2002 aaPredicted RBP12.21□□□□□ -0.45
SPG7-218ENST00000568205 K7EPK0 472 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 NDUFB8O95169 186 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 IFNA10P01566 189 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 NPY1RP25929 384 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 S100A10P60903 97 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 RAB32Q13637 225 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 C2orf83Q53S99 150 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 PVRIGQ6DKI7 326 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 SHISA2Q6UWI4 295 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 WDR89Q96FK6 387 aaPredicted RBP12.21□□□□□ -0.45
SPG7-218ENST00000568205 USMG5Q96IX5 58 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 UBE2E2Q96LR5 201 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 RAB40CQ96S21 281 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 THYN1Q9P016 225 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 FBXL7Q9UJT9 491 aa12.21□□□□□ -0.45
SPG7-218ENST00000568205 LSM5Q9Y4Y9 91 aaKnown RBP12.21□□□□□ -0.45
SPG7-218ENST00000568205 A0A0G2JLM5 398 aa12.2□□□□□ -0.46
SPG7-218ENST00000568205 TMEM50AO95807 157 aa12.2□□□□□ -0.46
SPG7-218ENST00000568205 CDX1P47902 265 aaPredicted RBP12.2□□□□□ -0.46
SPG7-218ENST00000568205 ATP5IP56385 69 aaPredicted RBP12.2□□□□□ -0.46
SPG7-218ENST00000568205 ATP5G2Q06055 141 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms