RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 C15orf32Q32M92 178 aa20.2■□□□□ 0.82
NME3-209ENST00000566600 ZNF343Q6P1L6 599 aa20.2■□□□□ 0.82
NME3-209ENST00000566600 LRTM2Q8N967 370 aa20.2■□□□□ 0.82
NME3-209ENST00000566600 GPR146Q96CH1 333 aa20.2■□□□□ 0.82
NME3-209ENST00000566600 FLVCR2Q9UPI3 526 aa20.2■□□□□ 0.82
NME3-209ENST00000566600 IGLV11-55A0A075B6I3 123 aa20.19■□□□□ 0.82
NME3-209ENST00000566600 DUS4LO95620 317 aaKnown RBP20.19■□□□□ 0.82
NME3-209ENST00000566600 ERHP84090 104 aaKnown RBP20.19■□□□□ 0.82
NME3-209ENST00000566600 DEFA5Q01523 94 aa20.19■□□□□ 0.82
NME3-209ENST00000566600 AARDQ4LEZ3 155 aa20.19■□□□□ 0.82
NME3-209ENST00000566600 Q6ZRM9 215 aa20.19■□□□□ 0.82
NME3-209ENST00000566600 C19orf35Q6ZS72 473 aa20.19■□□□□ 0.82
NME3-209ENST00000566600 MCRIP2Q9BUT9 160 aaKnown RBP20.19■□□□□ 0.82
NME3-209ENST00000566600 CACNG5Q9UF02 275 aa20.19■□□□□ 0.82
NME3-209ENST00000566600 F11RQ9Y624 299 aaKnown RBP20.19■□□□□ 0.82
NME3-209ENST00000566600 TCRBP04435 133 aa20.18■□□□□ 0.82
NME3-209ENST00000566600 SULT1A3P0DMM9 295 aa20.18■□□□□ 0.82
NME3-209ENST00000566600 SULT1A4P0DMN0 295 aa20.18■□□□□ 0.82
NME3-209ENST00000566600 EXOSC2Q13868 293 aaKnown RBP20.18■□□□□ 0.82
NME3-209ENST00000566600 LYZL2Q7Z4W2 148 aa20.18■□□□□ 0.82
NME3-209ENST00000566600 OR52E5Q8NH55 327 aa20.18■□□□□ 0.82
NME3-209ENST00000566600 C20orf85Q9H1P6 137 aa20.18■□□□□ 0.82
NME3-209ENST00000566600 PEF1Q9UBV8 284 aaKnown RBP20.18■□□□□ 0.82
NME3-209ENST00000566600 TBC1D24Q9ULP9 559 aa20.18■□□□□ 0.82
NME3-209ENST00000566600 IGHV4OR15-8A0A075B7B6 117 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 A0A087WW49 117 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 FAM240BA0A1B0GVZ2 78 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 C9orf170A2RU37 121 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 INS-IGF2F8WCM5 200 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 HLA-AP01891 365 aaKnown RBP20.17■□□□□ 0.82
NME3-209ENST00000566600 OR4E1P0C645 316 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 SPCS3P61009 180 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 ANKRD55Q3KP44 614 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 NMSQ5H8A3 153 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 OR2C3Q8N628 320 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 GPR61Q9BZJ8 451 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 ENY2Q9NPA8 101 aa20.17■□□□□ 0.82
NME3-209ENST00000566600 ZP3P21754 424 aa20.16■□□□□ 0.82
NME3-209ENST00000566600 C4orf46Q504U0 113 aa20.16■□□□□ 0.82
NME3-209ENST00000566600 SLC25A24Q6NUK1 477 aa20.16■□□□□ 0.82
NME3-209ENST00000566600 OR1P1Q8NH06 330 aa20.16■□□□□ 0.82
NME3-209ENST00000566600 CXorf58Q96LI9 332 aa20.16■□□□□ 0.82
NME3-209ENST00000566600 ANKRD34BA5PLL1 514 aa20.15■□□□□ 0.82
NME3-209ENST00000566600 NDUFB8O95169 186 aa20.15■□□□□ 0.82
NME3-209ENST00000566600 ANXA7P20073 488 aaKnown RBP20.15■□□□□ 0.82
NME3-209ENST00000566600 DHRS2Q13268 280 aa20.15■□□□□ 0.82
NME3-209ENST00000566600 SMCO1Q147U7 214 aa20.15■□□□□ 0.82
NME3-209ENST00000566600 LYG2Q86SG7 212 aa20.15■□□□□ 0.82
NME3-209ENST00000566600 ZNF114Q8NC26 417 aa20.15■□□□□ 0.82
NME3-209ENST00000566600 EEF1AKMT3Q96AZ1 226 aa20.15■□□□□ 0.82
NME3-209ENST00000566600 TMED3Q9Y3Q3 217 aa20.15■□□□□ 0.82
NME3-209ENST00000566600 CMYA5Q8N3K9 4069 aa20.14■□□□□ 0.82
NME3-209ENST00000566600 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.14■□□□□ 0.81
NME3-209ENST00000566600 A0A1B0GU03 582 aa20.14■□□□□ 0.81
NME3-209ENST00000566600 SNCAP37840 140 aa20.14■□□□□ 0.81
NME3-209ENST00000566600 HOXA1P49639 335 aaPredicted RBP20.14■□□□□ 0.81
NME3-209ENST00000566600 PDLIM3Q53GG5 364 aaPredicted RBP20.14■□□□□ 0.81
NME3-209ENST00000566600 COQ8AQ8NI60 647 aa20.14■□□□□ 0.81
NME3-209ENST00000566600 NUDT15Q9NV35 164 aa20.14■□□□□ 0.81
NME3-209ENST00000566600 IGLL1P15814 213 aa20.13■□□□□ 0.81
NME3-209ENST00000566600 DEFA1P59665 94 aa20.13■□□□□ 0.81
NME3-209ENST00000566600 DEFA3P59666 94 aa20.13■□□□□ 0.81
NME3-209ENST00000566600 SPINK9Q5DT21 86 aa20.13■□□□□ 0.81
NME3-209ENST00000566600 SAMD5Q5TGI4 173 aa20.13■□□□□ 0.81
NME3-209ENST00000566600 VN1R17PQ8TDU5 208 aa20.13■□□□□ 0.81
NME3-209ENST00000566600 DMRT1Q9Y5R6 373 aa20.13■□□□□ 0.81
NME3-209ENST00000566600 NOTCH3Q9UM47 2321 aa20.12■□□□□ 0.81
NME3-209ENST00000566600 TRAV6A0A075B6T7 132 aa20.12■□□□□ 0.81
NME3-209ENST00000566600 TRBV7-1A0A0A6YYK4 115 aa20.12■□□□□ 0.81
NME3-209ENST00000566600 SLC25A6P12236 298 aa20.12■□□□□ 0.81
NME3-209ENST00000566600 HOXD3P31249 432 aaPredicted RBP20.12■□□□□ 0.81
NME3-209ENST00000566600 SUB1P53999 127 aaKnown RBP eCLIP20.12■□□□□ 0.81
NME3-209ENST00000566600 SLURP1P55000 103 aa20.12■□□□□ 0.81
NME3-209ENST00000566600 ENKURQ8TC29 256 aa20.12■□□□□ 0.81
NME3-209ENST00000566600 H2AFB2P0C5Z0 115 aa20.11■□□□□ 0.81
NME3-209ENST00000566600 IFITM3Q01628 133 aa20.11■□□□□ 0.81
NME3-209ENST00000566600 OXLD1Q5BKU9 147 aa20.11■□□□□ 0.81
NME3-209ENST00000566600 DCUN1D4Q92564 292 aa20.11■□□□□ 0.81
NME3-209ENST00000566600 CEBPZOSA8MTT3 80 aa20.1■□□□□ 0.81
NME3-209ENST00000566600 G3V4G9 280 aa20.1■□□□□ 0.81
NME3-209ENST00000566600 OVOL1O14753 267 aa20.1■□□□□ 0.81
NME3-209ENST00000566600 MFAP2P55001 183 aa20.1■□□□□ 0.81
NME3-209ENST00000566600 OR1S1Q8NH92 325 aa20.1■□□□□ 0.81
NME3-209ENST00000566600 DLX4Q92988 240 aaPredicted RBP20.1■□□□□ 0.81
NME3-209ENST00000566600 NOTCH1P46531 2555 aa20.1■□□□□ 0.81
NME3-209ENST00000566600 MFSD2BA6NFX1 497 aa20.09■□□□□ 0.81
NME3-209ENST00000566600 TRBV12-3P01733 135 aa20.09■□□□□ 0.81
NME3-209ENST00000566600 HOXB5P09067 269 aa20.09■□□□□ 0.81
NME3-209ENST00000566600 TATDN3Q17R31 274 aa20.09■□□□□ 0.81
NME3-209ENST00000566600 RPEL1Q2QD12 228 aa20.09■□□□□ 0.81
NME3-209ENST00000566600 HEYLQ9NQ87 328 aaPredicted RBP20.09■□□□□ 0.81
NME3-209ENST00000566600 HSPB7Q9UBY9 170 aa20.09■□□□□ 0.81
NME3-209ENST00000566600 IFNA21P01568 189 aa20.08■□□□□ 0.81
NME3-209ENST00000566600 TNFRSF9Q07011 255 aa20.08■□□□□ 0.81
NME3-209ENST00000566600 MITD1Q8WV92 249 aa20.08■□□□□ 0.81
NME3-209ENST00000566600 CCDC140Q96MF4 163 aa20.08■□□□□ 0.81
NME3-209ENST00000566600 ATP6V0BQ99437 205 aa20.08■□□□□ 0.81
NME3-209ENST00000566600 HIPK2Q9H2X6 1198 aa20.08■□□□□ 0.81
NME3-209ENST00000566600 SEC14L6B5MCN3 397 aa20.07■□□□□ 0.8
NME3-209ENST00000566600 IGHV3-23P01764 117 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms