RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 IGHV3-48P01763 117 aa9.07□□□□□ -0.96
LINC00562-201ENST00000566385 OR13C7P0DN81 318 aa9.07□□□□□ -0.96
LINC00562-201ENST00000566385 AREGP15514 252 aa9.07□□□□□ -0.96
LINC00562-201ENST00000566385 SNCAP37840 140 aa9.07□□□□□ -0.96
LINC00562-201ENST00000566385 UBE2E1P51965 193 aa9.07□□□□□ -0.96
LINC00562-201ENST00000566385 RAB11AP62491 216 aa9.07□□□□□ -0.96
LINC00562-201ENST00000566385 CLEC12BQ2HXU8 276 aa9.07□□□□□ -0.96
LINC00562-201ENST00000566385 GCSAMLQ5JQS6 135 aa9.07□□□□□ -0.96
LINC00562-201ENST00000566385 RPP25LQ8N5L8 163 aaKnown RBP9.07□□□□□ -0.96
LINC00562-201ENST00000566385 PSMG3Q9BT73 122 aaPredicted RBP9.07□□□□□ -0.96
LINC00562-201ENST00000566385 SCRT1Q9BWW7 348 aa9.07□□□□□ -0.96
LINC00562-201ENST00000566385 WDR83OSQ9Y284 106 aa9.07□□□□□ -0.96
LINC00562-201ENST00000566385 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINC00562-201ENST00000566385 PRSS47A8MTI9 375 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 ADCYAP1P18509 176 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 RAB2AP61019 212 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 PAX8Q06710 450 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 RUSC1-AS1Q66K80 236 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 IL34Q6ZMJ4 242 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 CENPVQ7Z7K6 275 aaPredicted RBP9.06□□□□□ -0.96
LINC00562-201ENST00000566385 SFT2D1Q8WV19 159 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 CSPG4Q6UVK1 2322 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 IGKV1OR2-108A0A075B7D4 117 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 IGLC7A0M8Q6 106 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 HMGB3O15347 200 aaKnown RBP9.06□□□□□ -0.96
LINC00562-201ENST00000566385 LY86O95711 162 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 H2AFB1P0C5Y9 115 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 SERF2P84101 59 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 FAM120AOSQ5T036 256 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 P2RX4Q99571 388 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 MGST2Q99735 147 aa9.06□□□□□ -0.96
LINC00562-201ENST00000566385 ZMAT5Q9UDW3 170 aaKnown RBP9.06□□□□□ -0.96
LINC00562-201ENST00000566385 SOX21Q9Y651 276 aaPredicted RBP9.06□□□□□ -0.96
LINC00562-201ENST00000566385 PDZD2O15018 2839 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 MOSP00540 346 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 ZP3P21754 424 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 COMPP49747 757 aaPredicted RBP9.05□□□□□ -0.96
LINC00562-201ENST00000566385 FGF8P55075 233 aaPredicted RBP9.05□□□□□ -0.96
LINC00562-201ENST00000566385 PLGLAQ15195 96 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 C2orf83Q53S99 150 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 BRD3OSQ6XYD6 125 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 MMD2Q8IY49 270 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 RARRES2Q99969 163 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 ACTL6BO94805 426 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 PAX1P15863 534 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 MFAP2P55001 183 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 ERHP84090 104 aaKnown RBP9.05□□□□□ -0.96
LINC00562-201ENST00000566385 LCN15Q6UWW0 184 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 RCC1LQ96I51 464 aaKnown RBP9.05□□□□□ -0.96
LINC00562-201ENST00000566385 FAM103A1Q9BTL3 118 aaKnown RBP9.05□□□□□ -0.96
LINC00562-201ENST00000566385 FNDC4Q9H6D8 234 aaPredicted RBP9.05□□□□□ -0.96
LINC00562-201ENST00000566385 NPVFQ9HCQ7 196 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
LINC00562-201ENST00000566385 LSM4Q9Y4Z0 139 aaKnown RBP9.05□□□□□ -0.96
LINC00562-201ENST00000566385 TMEM218A2RU14 115 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 TEX22C9J3V5 150 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 J3QKU1 62 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 NBR2O15453 112 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 CD5P06127 495 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 RPL27AP46776 148 aaKnown RBP9.04□□□□□ -0.96
LINC00562-201ENST00000566385 DLK1P80370 383 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 GAMTQ14353 236 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 FFAR4Q5NUL3 377 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 MINOS1Q5TGZ0 78 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 OR2T6Q8NHC8 308 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 SSMEM1Q8WWF3 244 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 MINOS1-NBL1R4GNA1 71 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 A0A096LNT2 108 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 TRAV40A0A0B4J280 105 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 KRBOX1C9JBD0 128 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 INS-IGF2F8WCM5 200 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 AVPP01185 164 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 APOC3P02656 99 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 IGHV4-38-2P0DP08 117 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 MIC13Q5XKP0 118 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 SRSF12Q8WXF0 261 aaKnown RBP9.04□□□□□ -0.96
LINC00562-201ENST00000566385 GGACTQ9BVM4 153 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 GGTLC1Q9BX51 225 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 MRPL36Q9P0J6 103 aaKnown RBP9.04□□□□□ -0.96
LINC00562-201ENST00000566385 TIMM9Q9Y5J7 89 aa9.04□□□□□ -0.96
LINC00562-201ENST00000566385 A0A1W2PN81 502 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 NCBP2LA6PVI3 153 aaKnown RBP9.03□□□□□ -0.96
LINC00562-201ENST00000566385 NPFFO15130 113 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 NDUFA3O95167 84 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 MSMBP08118 114 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 GATA2P23769 480 aaPredicted RBP9.03□□□□□ -0.96
LINC00562-201ENST00000566385 CHRNA7P36544 502 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 GUK1Q16774 197 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 TMEM41BQ5BJD5 291 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 CCDC144NLQ6NUI1 221 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 UQCC3Q6UW78 93 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 MALSU1Q96EH3 234 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 RNF5Q99942 180 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 EIF5A2Q9GZV4 153 aaKnown RBP9.03□□□□□ -0.96
LINC00562-201ENST00000566385 SLC25A22Q9H936 323 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 DMRT1Q9Y5R6 373 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 CCDC168Q8NDH2 2452 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 YIF1AO95070 293 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 CD69Q07108 199 aa9.03□□□□□ -0.96
LINC00562-201ENST00000566385 ATRAIDQ6UW56 229 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms