RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 AKIRIN2Q53H80 203 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 FFAR4Q5NUL3 377 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 ZCCHC24Q8N2G6 241 aaKnown RBP5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 OSR1Q8TAX0 266 aaPredicted RBP5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 CA5BP1Q8WTZ4 195 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 MALSU1Q96EH3 234 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 DYNLRB1Q9NP97 96 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 ENY2Q9NPA8 101 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 MANBALQ9NQG1 85 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 BIN3Q9NQY0 253 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 KCNIP2Q9NS61 270 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 BET1LQ9NYM9 111 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 PRELID1Q9Y255 219 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 POLEQ07864 2286 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 TRAV3A0A0B4J244 114 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 SEC14L6B5MCN3 397 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 OPRK1P41145 380 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 HOXA1P49639 335 aaPredicted RBP5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 PSMB3P49720 205 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 RAB5BP61020 215 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 SSX7Q7RTT5 188 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 VKORC1L1Q8N0U8 176 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 Q8N7P7 452 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 OR13D1Q8NGV5 346 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 C20orf24Q9BUV8 137 aa5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 TET2Q6N021 2002 aaPredicted RBP5.91□□□□□ -1.46
HERPUD1-209ENST00000564678 SPTBN2O15020 2390 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 ARFGEF3Q5TH69 2177 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 IGHV1-69-2A0A0G2JMI3 117 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 SMCO3A2RU48 225 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 CBY3A6NI87 242 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 C1orf196B1AJZ1 125 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 UPK2O00526 184 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 RRHO14718 337 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 APOA2P02652 100 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 IFNA4P05014 189 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 STAG3L3P0CL85 134 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 IGFBP2P18065 325 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 AKR1C3P42330 323 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 GNG10P50151 68 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 FGF8P55075 233 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 MEF2BQ02080 365 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 TFF3Q07654 80 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 SPINK9Q5DT21 86 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 UTF1Q5T230 341 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 TREML4Q6UXN2 200 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 ABHD12Q8N2K0 398 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 OR5B3Q8NH48 314 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 AJUBAQ96IF1 538 aa5.9□□□□□ -1.46
HERPUD1-209ENST00000564678 INS-IGF2F8WCM5 200 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 J3QR06 171 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 SPRY2O43597 315 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 KBTBD11O94819 623 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 FBP1P09467 338 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 NPY1RP25929 384 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 PPIFP30405 207 aaKnown RBP5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 CDC34P49427 236 aaPredicted RBP5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 ZNF137PP52743 207 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 CEBPGP53567 150 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 PRCDQ00LT1 54 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 RAB31Q13636 194 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 ERASQ7Z444 233 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 C1QL4Q86Z23 238 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 OR4A5Q8NH83 315 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 VSTM2AQ8TAG5 236 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 TNFRSF14Q92956 283 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 TXNDC17Q9BRA2 123 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 PCGF1Q9BSM1 259 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 SDF2L1Q9HCN8 221 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 LSM4Q9Y4Z0 139 aaKnown RBP5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 OR51B2Q9Y5P1 312 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 KLF2Q9Y5W3 355 aaPredicted RBP5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 DMXL2Q8TDJ6 3036 aa5.9□□□□□ -1.47
HERPUD1-209ENST00000564678 A0A1W2PPV4 95 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 CCL21O00585 134 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 DVL1O14640 695 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 RAB5AP20339 215 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 WDR25Q64LD2 544 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 PDPNQ86YL7 162 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 FAM24BQ8N5W8 94 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 OR4C13Q8NGP0 309 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 OR9G1Q8NH87 305 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 TMEM170AQ8WVE7 144 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 ISOC2Q96AB3 205 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 YPEL4Q96NS1 127 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 C7orf69Q9H7B7 122 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 SLC25A22Q9H936 323 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 PLEKHA3Q9HB20 300 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 FAM30AQ9NZY2 134 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 RAXQ9Y2V3 346 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 ROS1P08922 2347 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 ATMQ13315 3056 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 SRRM4A7MD48 611 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 ZNF727A8MUV8 499 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 H0YJW9 148 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 K7EQM0 130 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 FCN3O75636 299 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 IGKV1-16P04430 117 aa5.89□□□□□ -1.47
HERPUD1-209ENST00000564678 CCL3L1P16619 93 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms