RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 C15orf62A8K5M9 175 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 SMIM18P0DKX4 95 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 RPA2P15927 270 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 HLA-DMAP28067 261 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 FCGR2BP31994 310 aaPredicted RBP9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 RCVRNP35243 200 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 TGFBR1P36897 503 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 LSM3P62310 102 aaKnown RBP9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 RELQ04864 619 aaPredicted RBP9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 Q6ZWC4 215 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 WFDC3Q8IUB2 231 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 OR4A16Q8NH70 328 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 HINT2Q9BX68 163 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 WFDC10AQ9H1F0 79 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 RETNQ9HD89 108 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 COMMD3Q9UBI1 195 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 SACSQ9NZJ4 4579 aa9.1□□□□□ -0.95
GTF3C1-204ENST00000564664 KIR2DL5BA0A0G2JN68 375 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 KIR2DL5BA0A0G2JPC4 375 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 C15orf61A6NNL5 157 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 ZNF701M0R085 212 aaPredicted RBP9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 RORCP51449 518 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 APOC4P55056 127 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 MZT2AQ6P582 158 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 H2BFWTQ7Z2G1 175 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 KIR2DL5AQ8N109 375 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 KIR2DL5BQ8NHK3 375 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 ZNF486Q96H40 463 aaPredicted RBP9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 FXYD6Q9H0Q3 95 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 NSG2Q9Y328 171 aa9.09□□□□□ -0.95
GTF3C1-204ENST00000564664 IGHV3-35A0A0C4DH35 117 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 OR4C46A6NHA9 309 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 K7EIM0 57 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 NUPL2O15504 423 aaKnown RBP9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 ATG12O94817 140 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 CD5P06127 495 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 EIF4EP06730 217 aaKnown RBP9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 CTSGP08311 255 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 ALDH3B2P48448 385 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 MFAP2P55001 183 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 MFAP4P55083 255 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 HSPE1P61604 102 aaKnown RBP9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 ERHP84090 104 aaKnown RBP9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 PHLDA2Q53GA4 152 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 Q56UQ5 140 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 TBC1D26Q86UD7 250 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 ZNF114Q8NC26 417 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 C15orf40Q8WUR7 153 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 AP3S1Q92572 193 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 SEC22AQ96IW7 307 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 OVOL2Q9BRP0 275 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 CHRDL1Q9BU40 450 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 FUNDC2Q9BWH2 189 aa9.08□□□□□ -0.96
GTF3C1-204ENST00000564664 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
GTF3C1-204ENST00000564664 ATF4P18848 351 aaPredicted RBP9.07□□□□□ -0.96
GTF3C1-204ENST00000564664 BMI1P35226 326 aa9.07□□□□□ -0.96
GTF3C1-204ENST00000564664 ADMP35318 185 aa9.07□□□□□ -0.96
GTF3C1-204ENST00000564664 RND3P61587 244 aa9.07□□□□□ -0.96
GTF3C1-204ENST00000564664 PRCDQ00LT1 54 aa9.07□□□□□ -0.96
GTF3C1-204ENST00000564664 OR10C1Q96KK4 312 aa9.07□□□□□ -0.96
GTF3C1-204ENST00000564664 C20orf24Q9BUV8 137 aa9.07□□□□□ -0.96
GTF3C1-204ENST00000564664 C6orf62Q9GZU0 229 aaPredicted RBP9.07□□□□□ -0.96
GTF3C1-204ENST00000564664 SMPXQ9UHP9 88 aa9.07□□□□□ -0.96
GTF3C1-204ENST00000564664 DNAH1Q9P2D7 4330 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 INS-IGF2F8WCM5 200 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 I3L2K1 104 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 SPRY2O43597 315 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 ELK1P19419 428 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 TBPP20226 339 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 TNFRSF9Q07011 255 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 SNX29P2Q8IUI4 249 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 STPG3Q8N7X2 389 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 UBAC2Q8NBM4 344 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 GALNT14Q96FL9 552 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 NXF2Q9GZY0 626 aaKnown RBP9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 RBM38Q9H0Z9 239 aaKnown RBP9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 PTTG2Q9NZH5 202 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 SELENOKQ9Y6D0 94 aa9.06□□□□□ -0.96
GTF3C1-204ENST00000564664 TRAV14DV4A0A0A6YYC5 116 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 IGHV3-21A0A0B4J1V1 117 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 IGHV7-4-1A0A0J9YVY3 117 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 DBX1A6NMT0 343 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 CHEK1O14757 476 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 HPGDSO60760 199 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 B3GALNT1O75752 331 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 IGKV1-39P01597 117 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 IGKV1D-39P04432 117 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 ZNF182P17025 639 aaPredicted RBP9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 SUB1P53999 127 aaKnown RBP eCLIP9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 VBP1P61758 197 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 NCS1P62166 190 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 ARRDC1Q8N5I2 433 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 TMEM217Q8N7C4 229 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 TMEM116Q8NCL8 245 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 ZFAND1Q8TCF1 268 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 MISP3Q96FF7 219 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 RHPN1-AS1Q9BWJ2 59 aa9.05□□□□□ -0.96
GTF3C1-204ENST00000564664 FAM25AB3EWG3 89 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 FAM25CB3EWG5 89 aa9.04□□□□□ -0.96
GTF3C1-204ENST00000564664 FAM25GB3EWG6 89 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms