RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 KIR3DL3Q8N743 410 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 ZNRF1Q8ND25 227 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 OR10V1Q8NGI7 309 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 SSMEM1Q8WWF3 244 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 DYRK2Q92630 601 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 GALMQ96C23 342 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 TMEM56Q96MV1 263 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 HDHD3Q9BSH5 251 aaPredicted RBP3.98□□□□□ -1.77
CASC4-207ENST00000559037 TMEM222Q9H0R3 208 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 HES4Q9HCC6 221 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 FAM212BQ9NTI7 297 aaPredicted RBP3.98□□□□□ -1.77
CASC4-207ENST00000559037 SDHAF2Q9NX18 166 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 TMEM56-RWDD3S4R434 201 aa3.98□□□□□ -1.77
CASC4-207ENST00000559037 TGP01266 2768 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 TRAV24A0A0B4J272 114 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 A0A1B0GU03 582 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 CLPSL1A2RUU4 121 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 NKX6-3A6NJ46 265 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 J3KRW8 73 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 K7N7A8 449 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 SLC33A1O00400 549 aaPredicted RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 VCYO14598 125 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 NPFFO15130 113 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 MED6O75586 246 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 ADAP1O75689 374 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 DFFBO76075 338 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 OR2H2O95918 312 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 HAND1O96004 215 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 IGHV4-59P01825 116 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 OMGP23515 440 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 UCP1P25874 307 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 RPL12P30050 165 aaKnown RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 PRDX2P32119 198 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 NKX2-1P43699 371 aaPredicted RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 GABRA2P47869 451 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 UBE2E1P51965 193 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 ARHGDIBP52566 201 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 DLX1P56177 255 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 DLX6P56179 175 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 RPL23AP62750 156 aaKnown RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 AANATQ16613 207 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 PHLDA2Q53GA4 152 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 SLC35E4Q6ICL7 350 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 ZNF497Q6ZNH5 498 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 ODF3L1Q8IXM7 274 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 H1FOOQ8IZA3 346 aaPredicted RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 GAPTQ8N292 157 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 STPG2Q8N412 459 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 PNKDQ8N490 385 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 ZNF561Q8N587 486 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 LFNGQ8NES3 379 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 MRPL30Q8TCC3 161 aaKnown RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 CD300LFQ8TDQ1 290 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 H1FXQ92522 213 aaKnown RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 LSM10Q969L4 123 aaKnown RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 RRNAD1Q96FB5 475 aaKnown RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 ZNF488Q96MN9 340 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 DUX3Q96PT4 197 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 RAB40CQ96S21 281 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 NCOR1P1Q9H4R4 102 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 TAF9BQ9HBM6 251 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 SIRT7Q9NRC8 400 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 TAS2R3Q9NYW6 316 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 ONECUT1Q9UBC0 465 aa3.97□□□□□ -1.77
CASC4-207ENST00000559037 STRAPQ9Y3F4 350 aaKnown RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 LSM5Q9Y4Y9 91 aaKnown RBP3.97□□□□□ -1.77
CASC4-207ENST00000559037 IGKV1D-8A0A087WSZ0 117 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 A0A1W2PPH5 198 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 MFSD2BA6NFX1 497 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 C17orf98A8MV24 154 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 ZNF705EA8MWA4 302 aaPredicted RBP3.96□□□□□ -1.78
CASC4-207ENST00000559037 UMAD1C9J7I0 102 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 FAM90A26D6RGX4 464 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 SIRPB1O00241 398 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 TOR1AO14656 332 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 SOX15O60248 233 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 ZNF737O75373 536 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 TSPAN9O75954 239 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 CRYZL1O95825 349 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 CFDP00746 253 aaPredicted RBP3.96□□□□□ -1.78
CASC4-207ENST00000559037 CRYBA1P05813 215 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 FBP1P09467 338 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 SEC11BP0C7V7 166 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 GZMHP20718 246 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 F2RP25116 425 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 KIR2DS2P43631 304 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 RAB7AP51149 207 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 AKR1C2P52895 323 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 F2RL1P55085 397 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 KRTAP10-3P60369 221 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 RPL31P62899 125 aaKnown RBP3.96□□□□□ -1.78
CASC4-207ENST00000559037 HBG1P69891 147 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 HBG2P69892 147 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 HTD2P86397 168 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 PRB3Q04118 309 aaPredicted RBP3.96□□□□□ -1.78
CASC4-207ENST00000559037 KLRD1Q13241 179 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 IL15RAQ13261 267 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 HMGN3Q15651 99 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 IGSF11Q5DX21 431 aa3.96□□□□□ -1.78
CASC4-207ENST00000559037 CXorf66Q5JRM2 361 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms