RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 TTC9CQ8N5M4 171 aa9.69□□□□□ -0.86
GABPB1-208ENST00000558970 KLHL30-AS1Q8NEE0 82 aa9.69□□□□□ -0.86
GABPB1-208ENST00000558970 CITED1Q99966 193 aa9.69□□□□□ -0.86
GABPB1-208ENST00000558970 ZNF747Q9BV97 191 aa9.69□□□□□ -0.86
GABPB1-208ENST00000558970 HEYLQ9NQ87 328 aaPredicted RBP9.69□□□□□ -0.86
GABPB1-208ENST00000558970 ZNF580Q9UK33 172 aa9.69□□□□□ -0.86
GABPB1-208ENST00000558970 NPIPB5A8MRT5 1133 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 SNRPGP15A8MWD9 76 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 IGHV3-23P01764 117 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 ELANEP08246 267 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 CTRB1P17538 263 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 CTRB2Q6GPI1 263 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 SLC25A24Q6NUK1 477 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 GSG1LQ6UXU4 331 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 COMMD1Q8N668 190 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 ZBTB8BQ8NAP8 495 aaPredicted RBP9.68□□□□□ -0.86
GABPB1-208ENST00000558970 DTD1Q8TEA8 209 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 TMEM68Q96MH6 324 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 DUX3Q96PT4 197 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 GNB4Q9HAV0 340 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 MGAT4CQ9UBM8 478 aa9.68□□□□□ -0.86
GABPB1-208ENST00000558970 PAIP2BQ9ULR5 123 aaKnown RBP9.68□□□□□ -0.86
GABPB1-208ENST00000558970 C7orf66A4D0T2 115 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 WRBO00258 174 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 SSSCA1O60232 199 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 PITX3O75364 302 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 SNCAP37840 140 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 MFAP2P55001 183 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 RPL23AP62750 156 aaKnown RBP9.67□□□□□ -0.86
GABPB1-208ENST00000558970 ERHP84090 104 aaKnown RBP9.67□□□□□ -0.86
GABPB1-208ENST00000558970 RHOGP84095 191 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 CD83Q01151 205 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 SHISA2Q6UWI4 295 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 C8orf86Q6ZUL3 223 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 MRPL41Q8IXM3 137 aaKnown RBP9.67□□□□□ -0.86
GABPB1-208ENST00000558970 OR2C3Q8N628 320 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 PINX1Q96BK5 328 aaKnown RBP9.67□□□□□ -0.86
GABPB1-208ENST00000558970 MISP3Q96FF7 219 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 HSPB7Q9UBY9 170 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 FBXL7Q9UJT9 491 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 LSM5Q9Y4Y9 91 aaKnown RBP9.67□□□□□ -0.86
GABPB1-208ENST00000558970 DMRT1Q9Y5R6 373 aa9.67□□□□□ -0.86
GABPB1-208ENST00000558970 TSSC4Q9Y5U2 329 aaPredicted RBP9.67□□□□□ -0.86
GABPB1-208ENST00000558970 ANKRD34BA5PLL1 514 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 H3BP45 60 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 NDUFB8O95169 186 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 IGHV3-48P01763 117 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 CRYGCP07315 174 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 SLC25A6P12236 298 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 NKX2-1P43699 371 aaPredicted RBP9.66□□□□□ -0.86
GABPB1-208ENST00000558970 S100A10P60903 97 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 POLR2GP62487 172 aaKnown RBP eCLIP9.66□□□□□ -0.86
GABPB1-208ENST00000558970 LRRC37A5PQ49AS3 106 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 HSD17B13Q7Z5P4 300 aaPredicted RBP9.66□□□□□ -0.86
GABPB1-208ENST00000558970 ZNF491Q8N8L2 437 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 OR4D5Q8NGN0 318 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 OR52E5Q8NH55 327 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 WDR89Q96FK6 387 aaPredicted RBP9.66□□□□□ -0.86
GABPB1-208ENST00000558970 P2RX4Q99571 388 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 HIPK2Q9H2X6 1198 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 SLA2Q9H6Q3 261 aa9.66□□□□□ -0.86
GABPB1-208ENST00000558970 F11RQ9Y624 299 aaKnown RBP9.66□□□□□ -0.86
GABPB1-208ENST00000558970 MFSD2BA6NFX1 497 aa9.65□□□□□ -0.86
GABPB1-208ENST00000558970 ADARB2-AS1A8MUL3 147 aa9.65□□□□□ -0.86
GABPB1-208ENST00000558970 SYNGR2O43760 224 aa9.65□□□□□ -0.86
GABPB1-208ENST00000558970 IFNA10P01566 189 aa9.65□□□□□ -0.86
GABPB1-208ENST00000558970 RNASE2P10153 161 aaKnown RBP9.65□□□□□ -0.86
GABPB1-208ENST00000558970 EXOSC2Q13868 293 aaKnown RBP9.65□□□□□ -0.86
GABPB1-208ENST00000558970 C15orf32Q32M92 178 aa9.65□□□□□ -0.86
GABPB1-208ENST00000558970 AARDQ4LEZ3 155 aa9.65□□□□□ -0.86
GABPB1-208ENST00000558970 C2orf50Q96LR7 162 aa9.65□□□□□ -0.86
GABPB1-208ENST00000558970 FANCD2OSQ96PS1 177 aa9.65□□□□□ -0.86
GABPB1-208ENST00000558970 SRSF8Q9BRL6 282 aaKnown RBP9.65□□□□□ -0.86
GABPB1-208ENST00000558970 MED28Q9H204 178 aa9.65□□□□□ -0.86
GABPB1-208ENST00000558970 RCL1Q9Y2P8 373 aaKnown RBP9.65□□□□□ -0.86
GABPB1-208ENST00000558970 IGLV11-55A0A075B6I3 123 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 H3BUA1 57 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 MED6O75586 246 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 TSPAN15O95858 294 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 MBPP02686 304 aaPredicted RBP9.64□□□□□ -0.87
GABPB1-208ENST00000558970 H2BFSP57053 126 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 ATP5G2Q06055 141 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 KIAA0141Q14154 515 aaPredicted RBP9.64□□□□□ -0.87
GABPB1-208ENST00000558970 FCN2Q15485 313 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 NDUFA11Q86Y39 141 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 UBAC2Q8NBM4 344 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 SLC24A4Q8NFF2 622 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 ZC4H2Q9NQZ6 224 aa9.64□□□□□ -0.87
GABPB1-208ENST00000558970 hCG_2014768A0A024R1R8 64 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 TRBV9A0A0B4J1U6 114 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 FAM223BA6NKX1 122 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 FAM90A26D6RGX4 464 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 CYB5BO43169 146 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 HIST1H1BP16401 226 aaKnown RBP9.63□□□□□ -0.87
GABPB1-208ENST00000558970 CXCL3P19876 107 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 NPY1RP25929 384 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 HTR2BP41595 481 aa9.63□□□□□ -0.87
GABPB1-208ENST00000558970 CDX1P47902 265 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms