RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 IFITM5A6NNB3 132 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 J3QRK9 145 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 PDCD5O14737 125 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 FABP7O15540 132 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 SPP1P10451 314 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 MAS1LP35410 378 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 CLDN12P56749 244 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 BRWD1-AS2P59051 145 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 ARFRP1Q13795 201 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 ACTL10Q5JWF8 245 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 ZNF773Q6PK81 442 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 OR10W1Q8NGF6 305 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 ATG101Q9BSB4 218 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 CABLES2Q9BTV7 478 aa8.34□□□□□ -1.07
SMAD3-206ENST00000558739 TRBV6-7A0A0A0MS04 114 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 TRAV3A0A0B4J244 114 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 DFFBO76075 338 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 HLA-GP17693 338 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 RAB3BP20337 219 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 OR10A3P58181 314 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 FAM3BP58499 235 aaPredicted RBP8.33□□□□□ -1.08
SMAD3-206ENST00000558739 OR2B8PP59922 312 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 RPL8P62917 257 aaKnown RBP8.33□□□□□ -1.08
SMAD3-206ENST00000558739 KCTD21Q4G0X4 260 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 PLAC9Q5JTB6 97 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 HES5Q5TA89 166 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 C22orf42Q6IC83 251 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 Q6ZSN1 163 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 KCTD9Q7L273 389 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 OR56B1Q8NGI3 324 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 VN1R17PQ8TDU5 208 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 ARHGAP5-AS1Q96IT6 56 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 ADTRPQ96IZ2 230 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 GPHA2Q96T91 129 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 PECRQ9BY49 303 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 TXNL4BQ9NX01 149 aaKnown RBP8.33□□□□□ -1.08
SMAD3-206ENST00000558739 XCL2Q9UBD3 114 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 RAB22AQ9UL26 194 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 MGAT4AQ9UM21 535 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 PLA2G2DQ9UNK4 145 aa8.33□□□□□ -1.08
SMAD3-206ENST00000558739 YIF1AO95070 293 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 CTSGP08311 255 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 ZNF688P0C7X2 276 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 SPART-AS1P0CW21 52 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 RAB6AP20340 208 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 MYL9P24844 172 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 PSMB9P28065 219 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 TMEM41BQ5BJD5 291 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 FAM222AQ5U5X8 452 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 SPSB3Q6PJ21 355 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 OR4A4PQ8NGN8 299 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 OR10J5Q8NHC4 309 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 SCARB1Q8WTV0 552 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 OR10C1Q96KK4 312 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 CMTM3Q96MX0 182 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 C21orf62Q9NYP8 219 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 DKK2Q9UBU2 259 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 RABAC1Q9UI14 185 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 KCNK7Q9Y2U2 307 aa8.32□□□□□ -1.08
SMAD3-206ENST00000558739 RBM7Q9Y580 266 aaKnown RBP8.32□□□□□ -1.08
SMAD3-206ENST00000558739 K7EIM0 57 aa8.31□□□□□ -1.08
SMAD3-206ENST00000558739 DNASE2O00115 360 aaPredicted RBP8.31□□□□□ -1.08
SMAD3-206ENST00000558739 IGLV2-14P01704 120 aa8.31□□□□□ -1.08
SMAD3-206ENST00000558739 SERPINB10P48595 397 aa8.31□□□□□ -1.08
SMAD3-206ENST00000558739 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
SMAD3-206ENST00000558739 TPRA1Q86W33 373 aa8.31□□□□□ -1.08
SMAD3-206ENST00000558739 OR10R2Q8NGX6 335 aa8.31□□□□□ -1.08
SMAD3-206ENST00000558739 CMSS1Q9BQ75 279 aaKnown RBP8.31□□□□□ -1.08
SMAD3-206ENST00000558739 NOTOA8MTQ0 251 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 MFNGO00587 321 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 ST8SIA3O43173 380 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 BTF3P20290 206 aaKnown RBP8.3□□□□□ -1.08
SMAD3-206ENST00000558739 RPL11P62913 178 aaKnown RBP8.3□□□□□ -1.08
SMAD3-206ENST00000558739 PAFAH1B2P68402 229 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 WT1-ASQ06250 92 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 Q56UQ5 140 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 GDPD1Q8N9F7 314 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 RAB3CQ96E17 227 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 SRSF8Q9BRL6 282 aaKnown RBP8.3□□□□□ -1.08
SMAD3-206ENST00000558739 NIPSNAP3BQ9BS92 247 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 SSR3Q9UNL2 185 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 LINC00588Q9Y4M8 146 aa8.3□□□□□ -1.08
SMAD3-206ENST00000558739 IGKV1D-8A0A087WSZ0 117 aa8.29□□□□□ -1.08
SMAD3-206ENST00000558739 TRAV14DV4A0A0A6YYC5 116 aa8.29□□□□□ -1.08
SMAD3-206ENST00000558739 KRTAP29-1A8MX34 341 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-206ENST00000558739 DIRAS3O95661 229 aa8.29□□□□□ -1.08
SMAD3-206ENST00000558739 FCGR3AP08637 254 aa8.29□□□□□ -1.08
SMAD3-206ENST00000558739 HIST1H1DP16402 221 aaKnown RBP8.29□□□□□ -1.08
SMAD3-206ENST00000558739 TIMM50Q3ZCQ8 353 aa8.29□□□□□ -1.08
SMAD3-206ENST00000558739 SLC25A24Q6NUK1 477 aa8.29□□□□□ -1.08
SMAD3-206ENST00000558739 H1FOOQ8IZA3 346 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-206ENST00000558739 SYT8Q8NBV8 401 aa8.29□□□□□ -1.08
SMAD3-206ENST00000558739 OR4S2Q8NH73 311 aa8.29□□□□□ -1.08
SMAD3-206ENST00000558739 VSTM2AQ8TAG5 236 aa8.29□□□□□ -1.08
SMAD3-206ENST00000558739 DGCR14Q96DF8 476 aaKnown RBP8.29□□□□□ -1.08
SMAD3-206ENST00000558739 VSIRQ9H7M9 311 aa8.29□□□□□ -1.08
SMAD3-206ENST00000558739 MRPS7Q9Y2R9 242 aaKnown RBP8.29□□□□□ -1.08
SMAD3-206ENST00000558739 IGKV1D-13A0A0B4J2D9 117 aa8.28□□□□□ -1.08
SMAD3-206ENST00000558739 METTL21EPA6NDL7 271 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms