RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 MAFIPQ8WZ33 124 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 PHYHIPQ92561 330 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 DGCR14Q96DF8 476 aaKnown RBP4.8□□□□□ -1.64
LRRC28-207ENST00000558500 OR10C1Q96KK4 312 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 SRSF8Q9BRL6 282 aaKnown RBP4.8□□□□□ -1.64
LRRC28-207ENST00000558500 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 RNF167Q9H6Y7 350 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 BET1LQ9NYM9 111 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 LOC100130705A0A1B0GUX0 176 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 K7EIM0 57 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 DNASE2O00115 360 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-207ENST00000558500 SLC22A5O76082 557 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 YIF1AO95070 293 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 HRASP01112 189 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 SPART-AS1P0CW21 52 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 RELQ04864 619 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-207ENST00000558500 EIF4EBP1Q13541 118 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-207ENST00000558500 TIMM50Q3ZCQ8 353 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 ACSM3Q53FZ2 586 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 Q56UQ5 140 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 SLC25A24Q6NUK1 477 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 ZNF66Q6ZN08 573 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 CBR4Q8N4T8 237 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 OR10W1Q8NGF6 305 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 OR56B1Q8NGI3 324 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 ST8SIA2Q92186 375 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 TMEM80Q96HE8 168 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 C18orf15Q96N68 181 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 CENPOQ9BU64 300 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 QTRT1Q9BXR0 403 aaKnown RBP4.79□□□□□ -1.64
LRRC28-207ENST00000558500 YTHDF1Q9BYJ9 559 aaKnown RBP4.79□□□□□ -1.64
LRRC28-207ENST00000558500 TMEM140Q9NV12 185 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 KCNK7Q9Y2U2 307 aa4.79□□□□□ -1.64
LRRC28-207ENST00000558500 IGKV1D-8A0A087WSZ0 117 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 TRAV3A0A0B4J244 114 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 KNCNA6PVL3 124 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-207ENST00000558500 UPK2O00526 184 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 ST8SIA3O43173 380 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 HLA-DQB1P01920 261 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 SERPINE2P07093 398 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 OR13C7P0DN81 318 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 KRTAP10-2P60368 255 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 WT1-ASQ06250 92 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 C1orf146Q5VVC0 180 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 UBE2UQ5VVX9 321 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 Q6ZS49 121 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 HSD17B13Q7Z5P4 300 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-207ENST00000558500 DUSP18Q8NEJ0 188 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 RAB3CQ96E17 227 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 HSD17B10Q99714 261 aaKnown RBP4.78□□□□□ -1.64
LRRC28-207ENST00000558500 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 C1orf43Q9BWL3 253 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 COMMD5Q9GZQ3 224 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 VSIRQ9H7M9 311 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 HRASLSQ9HDD0 168 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 RABAC1Q9UI14 185 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 SPATA2Q9UM82 520 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 OR2W1Q9Y3N9 320 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 TMED3Q9Y3Q3 217 aa4.78□□□□□ -1.64
LRRC28-207ENST00000558500 F11RQ9Y624 299 aaKnown RBP4.78□□□□□ -1.64
LRRC28-207ENST00000558500 IGKV1D-13A0A0B4J2D9 117 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 TMEM189A5PLL7 270 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 EFCAB10A6NFE3 127 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 SLC17A2O00624 439 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 DENRO43583 198 aaKnown RBP4.77□□□□□ -1.65
LRRC28-207ENST00000558500 APOHP02749 345 aaPredicted RBP4.77□□□□□ -1.65
LRRC28-207ENST00000558500 EIF4EP06730 217 aaKnown RBP4.77□□□□□ -1.65
LRRC28-207ENST00000558500 FGF2P09038 288 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 TRAPPC2P0DI81 140 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 TRAPPC2BP0DI82 140 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 IGKV1-13P0DP09 117 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 GYPEP15421 78 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 NFYAP23511 347 aaPredicted RBP4.77□□□□□ -1.65
LRRC28-207ENST00000558500 SRSF3P84103 164 aaKnown RBP4.77□□□□□ -1.65
LRRC28-207ENST00000558500 RAB11BQ15907 218 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 HSD17B12Q53GQ0 312 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 ACTL10Q5JWF8 245 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 Q5VSD8 79 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 THOC7Q6I9Y2 204 aaKnown RBP4.77□□□□□ -1.65
LRRC28-207ENST00000558500 TMEM88Q6PEY1 159 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 ZNF773Q6PK81 442 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 LYPD1Q8N2G4 141 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 MS4A15Q8N5U1 240 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 ZNRF2Q8NHG8 242 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 GRAMD2BQ96HH9 432 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 NEU1Q99519 415 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 GFI1Q99684 422 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 AIFM2Q9BRQ8 373 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 PLGRKTQ9HBL7 147 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 TAS2R8Q9NYW2 309 aa4.77□□□□□ -1.65
LRRC28-207ENST00000558500 AGRNO00468 2067 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 IGHV3-66A0A0C4DH42 116 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 TEX50A0A1B0GTY4 177 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 TEX48A0A1B0GUV7 120 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 K7EQG2 157 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 MFNGO00587 321 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 UCHL1P09936 223 aa4.76□□□□□ -1.65
LRRC28-207ENST00000558500 CTXN2P0C2S0 81 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms