RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 OR51B2Q9Y5P1 312 aa9.06□□□□□ -0.96
RORA-207ENST00000558234 WNK2Q9Y3S1 2297 aa9.06□□□□□ -0.96
RORA-207ENST00000558234 CST7O76096 145 aa9.06□□□□□ -0.96
RORA-207ENST00000558234 RPL23AP62750 156 aaKnown RBP9.06□□□□□ -0.96
RORA-207ENST00000558234 OR1L8Q8NGR8 309 aa9.06□□□□□ -0.96
RORA-207ENST00000558234 RPEQ96AT9 228 aa9.06□□□□□ -0.96
RORA-207ENST00000558234 ZNF414Q96IQ9 312 aa9.06□□□□□ -0.96
RORA-207ENST00000558234 HARBI1Q96MB7 349 aa9.06□□□□□ -0.96
RORA-207ENST00000558234 PSMG3Q9BT73 122 aaPredicted RBP9.06□□□□□ -0.96
RORA-207ENST00000558234 ZNF702PQ9H963 129 aa9.06□□□□□ -0.96
RORA-207ENST00000558234 NDUFA7O95182 113 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 RNASE2P10153 161 aaKnown RBP9.05□□□□□ -0.96
RORA-207ENST00000558234 EGR2P11161 476 aaPredicted RBP9.05□□□□□ -0.96
RORA-207ENST00000558234 MAS1LP35410 378 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 TIMM9Q9Y5J7 89 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 TSPAN9O75954 239 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 MOSP00540 346 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 ATP6V0CP27449 155 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 MFAP2P55001 183 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 PARP11Q9NR21 331 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 H3BUX3 64 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 METTL15P1P0C7V9 234 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 COMPP49747 757 aaPredicted RBP9.05□□□□□ -0.96
RORA-207ENST00000558234 PJVKQ0ZLH3 352 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 SCGB2A2Q13296 93 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 PRSS8Q16651 343 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 SSX9Q7RTT3 188 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 LRRC20Q8TCA0 184 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 PCNPQ8WW12 178 aaKnown RBP9.05□□□□□ -0.96
RORA-207ENST00000558234 TMED6Q8WW62 240 aa9.05□□□□□ -0.96
RORA-207ENST00000558234 H3BP45 60 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 APOA2P02652 100 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 CRYGCP07315 174 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 ATP5IP56385 69 aaPredicted RBP9.04□□□□□ -0.96
RORA-207ENST00000558234 KRTAP21-3Q3LHN1 58 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 ARSJQ5FYB0 599 aaPredicted RBP9.04□□□□□ -0.96
RORA-207ENST00000558234 C10orf91Q5T1B1 145 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 HSD17B13Q7Z5P4 300 aaPredicted RBP9.04□□□□□ -0.96
RORA-207ENST00000558234 NAV3Q8IVL0 2385 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 PLXNB1O43157 2135 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 ASPHD1Q5U4P2 390 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 SPSB3Q6PJ21 355 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 FKBP11Q9NYL4 201 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 SCAF4O95104 1147 aaKnown RBP9.04□□□□□ -0.96
RORA-207ENST00000558234 ZNF266Q14584 549 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 ZNF726P1Q15940 193 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 ATP6V1FQ16864 119 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 OR1S2Q8NGQ3 325 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 OR4A16Q8NH70 328 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 SMIM3Q9BZL3 60 aa9.04□□□□□ -0.96
RORA-207ENST00000558234 IGKV1D-33P01593 117 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 IGKV1-33P01594 117 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 CAV2P51636 162 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 ERVK-16P61578 105 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 RPL8P62917 257 aaKnown RBP9.03□□□□□ -0.96
RORA-207ENST00000558234 RNF141Q8WVD5 230 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 WNT10AQ9GZT5 417 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 C1RLQ9NZP8 487 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 NUP62P37198 522 aaPredicted RBP9.03□□□□□ -0.96
RORA-207ENST00000558234 SPINK9Q5DT21 86 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 SSX7Q7RTT5 188 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 OR10W1Q8NGF6 305 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 OR2T10Q8NGZ9 312 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 VSTM2AQ8TAG5 236 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 C22orf15Q8WYQ4 148 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 SRSF8Q9BRL6 282 aaKnown RBP9.03□□□□□ -0.96
RORA-207ENST00000558234 WDR83OSQ9Y284 106 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 IGKV1OR2-108A0A075B7D4 117 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 HLA-DRB1P01911 266 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 LGALS4P56470 323 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 Q6ZS46 218 aa9.03□□□□□ -0.96
RORA-207ENST00000558234 PSMB11A5LHX3 300 aa9.02□□□□□ -0.96
RORA-207ENST00000558234 SHOXO15266 292 aa9.02□□□□□ -0.96
RORA-207ENST00000558234 BRI3O95415 125 aa9.02□□□□□ -0.96
RORA-207ENST00000558234 SRP14P37108 136 aaKnown RBP9.02□□□□□ -0.96
RORA-207ENST00000558234 VAMP2P63027 116 aa9.02□□□□□ -0.96
RORA-207ENST00000558234 DLK1P80370 383 aa9.02□□□□□ -0.96
RORA-207ENST00000558234 PMS2P11Q13670 270 aa9.02□□□□□ -0.96
RORA-207ENST00000558234 SPANXN5Q5MJ07 72 aa9.02□□□□□ -0.96
RORA-207ENST00000558234 TREML4Q6UXN2 200 aa9.02□□□□□ -0.96
RORA-207ENST00000558234 STRAPQ9Y3F4 350 aaKnown RBP9.02□□□□□ -0.96
RORA-207ENST00000558234 FCN1O00602 326 aa9.02□□□□□ -0.97
RORA-207ENST00000558234 DPPA3Q6W0C5 159 aa9.02□□□□□ -0.97
RORA-207ENST00000558234 MOB4Q9Y3A3 225 aa9.02□□□□□ -0.97
RORA-207ENST00000558234 TLN2Q9Y4G6 2542 aa9.02□□□□□ -0.97
RORA-207ENST00000558234 TRAV1-1A0A0B4J248 108 aa9.02□□□□□ -0.97
RORA-207ENST00000558234 DFFBO76075 338 aa9.02□□□□□ -0.97
RORA-207ENST00000558234 CA2P00918 260 aa9.02□□□□□ -0.97
RORA-207ENST00000558234 CD24P25063 80 aa9.02□□□□□ -0.97
RORA-207ENST00000558234 SLC38A11Q08AI6 406 aa9.02□□□□□ -0.97
RORA-207ENST00000558234 TAF15Q92804 592 aaKnown RBP eCLIP9.02□□□□□ -0.973e-6■■■□□ 15.1
RORA-207ENST00000558234 TENM1Q9UKZ4 2725 aa9.02□□□□□ -0.97
RORA-207ENST00000558234 IGF1P05019 195 aa9.01□□□□□ -0.97
RORA-207ENST00000558234 FAM106CPP0CH98 169 aa9.01□□□□□ -0.97
RORA-207ENST00000558234 RUNX1Q01196 453 aa9.01□□□□□ -0.97
RORA-207ENST00000558234 PPP1R27Q86WC6 154 aa9.01□□□□□ -0.97
RORA-207ENST00000558234 VSIRQ9H7M9 311 aa9.01□□□□□ -0.97
RORA-207ENST00000558234 SERTAD4Q9NUC0 356 aa9.01□□□□□ -0.97
RORA-207ENST00000558234 IGHV3-72A0A0B4J1Y9 119 aa9.01□□□□□ -0.97
RORA-207ENST00000558234 ANKRD34BA5PLL1 514 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms