RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 C2orf76Q3KRA6 126 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 HSD17B12Q53GQ0 312 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 OR2B11Q5JQS5 317 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 PLAC9Q5JTB6 97 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 MORN3Q6PF18 240 aaPredicted RBP3.75□□□□□ -1.81
SPG11-208ENST00000558155 Q6ZR54 194 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 SLC51BQ86UW2 128 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 MFSD4AQ8N468 514 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 GBGT1Q8N5D6 347 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 ZNF485Q8NCK3 441 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 DUSP18Q8NEJ0 188 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 PYDC1Q8WXC3 89 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 HSD17B10Q99714 261 aaKnown RBP3.75□□□□□ -1.81
SPG11-208ENST00000558155 CHRDL1Q9BU40 450 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 COMMD5Q9GZQ3 224 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 KCNK15Q9H427 330 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 HRASLSQ9HDD0 168 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 SCRT2Q9NQ03 307 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 C21orf62Q9NYP8 219 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 RAB22AQ9UL26 194 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 RBMX2Q9Y388 322 aaKnown RBP3.75□□□□□ -1.81
SPG11-208ENST00000558155 OR2W1Q9Y3N9 320 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 AGRNO00468 2067 aa3.75□□□□□ -1.81
SPG11-208ENST00000558155 IGHV3OR16-8A0A075B7F1 116 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 TRAV14DV4A0A0A6YYC5 116 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 ZNF705EA8MWA4 302 aaPredicted RBP3.74□□□□□ -1.81
SPG11-208ENST00000558155 SLC17A2O00624 439 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 MYL12BO14950 172 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 NUPL2O15504 423 aaKnown RBP3.74□□□□□ -1.81
SPG11-208ENST00000558155 YIF1AO95070 293 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 HLA-DQB1P01920 261 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 EIF4EP06730 217 aaKnown RBP3.74□□□□□ -1.81
SPG11-208ENST00000558155 SPP1P10451 314 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 GADD45AP24522 165 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 NUP62P37198 522 aaPredicted RBP3.74□□□□□ -1.81
SPG11-208ENST00000558155 WNT4P56705 351 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 DEFB131AP59861 70 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 OR2B8PP59922 312 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 RPL30P62888 115 aaKnown RBP3.74□□□□□ -1.81
SPG11-208ENST00000558155 RPL11P62913 178 aaKnown RBP3.74□□□□□ -1.81
SPG11-208ENST00000558155 RAB11BQ15907 218 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 RNF212Q495C1 297 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 Q56UQ5 140 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 FAM90A2PQ658T7 463 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 ZFP1Q6P2D0 407 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 ZNF66Q6ZN08 573 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 Q6ZRM9 215 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 Q6ZS49 121 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 HSD17B13Q7Z5P4 300 aaPredicted RBP3.74□□□□□ -1.81
SPG11-208ENST00000558155 TCTEX1D2Q8WW35 142 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 FAM3DQ96BQ1 224 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 DGCR14Q96DF8 476 aaKnown RBP3.74□□□□□ -1.81
SPG11-208ENST00000558155 RAB3CQ96E17 227 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 FAM210BQ96KR6 192 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 KRTAP9-3Q9BYQ3 159 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 BET1LQ9NYM9 111 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 TBC1D24Q9ULP9 559 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 SPATA2Q9UM82 520 aa3.74□□□□□ -1.81
SPG11-208ENST00000558155 A0A075B6Q4 140 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 IGHV3-49A0A0A0MS15 119 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 TRAV2A0A0B4J234 112 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 IGLC7A0M8Q6 106 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 METTL21EPA6NDL7 271 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 CGB1A6NKQ9 187 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 UPK2O00526 184 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 CIDEAO60543 219 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 CD74P04233 296 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 SERPINE2P07093 398 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 CTSGP08311 255 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 TRAPPC2P0DI81 140 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 TRAPPC2BP0DI82 140 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 OR13C7P0DN81 318 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 GNB3P16520 340 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 TSPAN5P62079 268 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 INSL4Q14641 139 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 ARL6IP1Q15041 203 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 LEMD1Q68G75 181 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 FAM122CQ6P4D5 195 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 TCF24Q7RTU0 167 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 NANOGP1Q8N7R0 232 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 GDPD1Q8N9F7 314 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 UBAC2Q8NBM4 344 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 OR10R2Q8NGX6 335 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 SCARB1Q8WTV0 552 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 MAFIPQ8WZ33 124 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 OR10C1Q96KK4 312 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 QTRT1Q9BXR0 403 aaKnown RBP3.73□□□□□ -1.81
SPG11-208ENST00000558155 RNF167Q9H6Y7 350 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 TMEM14BQ9NUH8 114 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 KCNK7Q9Y2U2 307 aa3.73□□□□□ -1.81
SPG11-208ENST00000558155 AK6Q9Y3D8 172 aaKnown RBP3.73□□□□□ -1.81
SPG11-208ENST00000558155 IGHV3OR16-13A0A075B7E8 117 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 IGHV3-21A0A0B4J1V1 117 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 IGHV3-74A0A0B4J1X5 117 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 TEX50A0A1B0GTY4 177 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 LOC105371267A0A1B0GV96 52 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 HSBP1L1C9JCN9 74 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 ST8SIA3O43173 380 aa3.72□□□□□ -1.81
SPG11-208ENST00000558155 RBFOX2O43251 390 aaKnown RBP eCLIP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms