RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 KPNA4O00629 521 aaPredicted RBP2.29□□□□□ -2.04
TDP1-217ENST00000557782 TP53I11O14683 189 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 IGKV1-5P01602 117 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 OR10J4P0C629 311 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 S100A4P26447 101 aaKnown RBP2.29□□□□□ -2.04
TDP1-217ENST00000557782 MEF2BQ02080 365 aaPredicted RBP2.29□□□□□ -2.04
TDP1-217ENST00000557782 ZNF117Q03924 483 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 SURF2Q15527 256 aaPredicted RBP2.29□□□□□ -2.04
TDP1-217ENST00000557782 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 ZNF705AQ6ZN79 300 aaPredicted RBP2.29□□□□□ -2.04
TDP1-217ENST00000557782 LCA10Q71F78 164 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 ZNF767PQ75MW2 155 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 CROCCP2Q86T23 111 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 NUP35Q8NFH5 326 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 OR10D4PQ8NGN7 298 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 OR9Q1Q8NGQ5 310 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 CLDND2Q8NHS1 167 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 SMCR5Q8TEV8 140 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 LZICQ8WZA0 190 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 RMND5BQ96G75 393 aaPredicted RBP2.29□□□□□ -2.04
TDP1-217ENST00000557782 RNF122Q9H9V4 155 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 SLC39A9Q9NUM3 307 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 TXNL4BQ9NX01 149 aaKnown RBP2.29□□□□□ -2.04
TDP1-217ENST00000557782 SPANXCQ9NY87 97 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 AMMECR1Q9Y4X0 333 aaPredicted RBP2.29□□□□□ -2.04
TDP1-217ENST00000557782 ATRXP46100 2492 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 NYNRINQ9P2P1 1898 aaKnown RBP2.28□□□□□ -2.04
TDP1-217ENST00000557782 TRPM3Q9HCF6 1732 aaPredicted RBP2.28□□□□□ -2.04
TDP1-217ENST00000557782 LTBP4Q8N2S1 1624 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 SETD5Q9C0A6 1442 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 IGKV1D-43A0A0B4J1Z2 117 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 TRAV41A0A0B4J266 112 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 IRGMA1A4Y4 181 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 ARL5CA6NH57 179 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 GGTLC3B5MD39 225 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 H3BPC8 53 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 CREBL2O60519 120 aaPredicted RBP2.28□□□□□ -2.04
TDP1-217ENST00000557782 CST8O60676 142 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 CSN2P05814 226 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 GZMHP20718 246 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 CD24P25063 80 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 MIAQ16674 131 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 SPANXN3Q5MJ09 141 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 TRAPPC6BQ86SZ2 158 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 EXOC3-AS1Q8N2X6 119 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 BORCS5Q969J3 196 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 HSPB9Q9BQS6 159 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 KRTAP4-7Q9BYR0 210 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 TTTY13Q9BZ97 58 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 DUSP21Q9H596 190 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 HEY1Q9Y5J3 304 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 MYH10P35580 1976 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 MYH7BA7E2Y1 1941 aa2.28□□□□□ -2.04
TDP1-217ENST00000557782 PTPRSQ13332 1948 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 ECM29Q5VYK3 1845 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 IGKV2-28A0A075B6P5 120 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 IGKV6D-41A0A0C4DH26 115 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 A0A1B0GU33 70 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 A0A1W2PQD3 144 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 TMEM235A6NFC5 223 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 COLCA2A8K830 154 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 C17orf98A8MV24 154 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 TRAPPC2LH3BP13 241 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 ARPC5O15511 151 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 CYB5BO43169 146 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 ZNF73O43830 326 aaPredicted RBP2.27□□□□□ -2.05
TDP1-217ENST00000557782 FAM107AO95990 144 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 SOD1P00441 154 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 IGKV2D-28P01615 120 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 GZMBP10144 247 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 OGNP20774 298 aaKnown RBP2.27□□□□□ -2.05
TDP1-217ENST00000557782 HLA-DMBP28068 263 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 CA5AP35218 305 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 XCL1P47992 114 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 ZNF80P51504 273 aaPredicted RBP2.27□□□□□ -2.05
TDP1-217ENST00000557782 YPEL3P61236 119 aaPredicted RBP2.27□□□□□ -2.05
TDP1-217ENST00000557782 RPS11P62280 158 aaKnown RBP eCLIP2.27□□□□□ -2.05
TDP1-217ENST00000557782 FLI1Q01543 452 aaPredicted RBP2.27□□□□□ -2.05
TDP1-217ENST00000557782 BAMBIQ13145 260 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 RRN3P1Q2M238 152 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.27□□□□□ -2.05
TDP1-217ENST00000557782 C2orf91Q6ZV80 131 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 TCF24Q7RTU0 167 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 DHFR2Q86XF0 187 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 Q8NAQ8 132 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 OR5J2Q8NH18 312 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 OR8B2Q96RD0 313 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 TM2D3Q9BRN9 247 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 KRTAP2-2Q9BYT5 123 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 OR2J1Q9GZK6 312 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 AICDAQ9GZX7 198 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 FAM107BQ9H098 131 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 C16orf95Q9H693 158 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 TUBA4BQ9H853 241 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 TP73-AS1Q9UF72 201 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 COL18A1P39060 1754 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 PLXNB1O43157 2135 aa2.27□□□□□ -2.05
TDP1-217ENST00000557782 SPATA31E1Q6ZUB1 1445 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 ARHGEF10O15013 1369 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 TRPM6Q9BX84 2022 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms