RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SCPEP1Q9HB40 452 aa10.93□□□□□ -0.66
SHMT2-235ENST00000557740 TSPAN4O14817 238 aa10.92□□□□□ -0.66
SHMT2-235ENST00000557740 APOA1P02647 267 aa10.92□□□□□ -0.66
SHMT2-235ENST00000557740 RCVRNP35243 200 aa10.92□□□□□ -0.66
SHMT2-235ENST00000557740 LYSMD2Q8IV50 215 aa10.92□□□□□ -0.66
SHMT2-235ENST00000557740 SCARB1Q8WTV0 552 aa10.92□□□□□ -0.66
SHMT2-235ENST00000557740 OVOL2Q9BRP0 275 aa10.92□□□□□ -0.66
SHMT2-235ENST00000557740 CHRDL1Q9BU40 450 aa10.92□□□□□ -0.66
SHMT2-235ENST00000557740 FAM212BQ9NTI7 297 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-235ENST00000557740 TMEM14BQ9NUH8 114 aa10.92□□□□□ -0.66
SHMT2-235ENST00000557740 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 K7EIM0 57 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 APOC4P55056 127 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 NCS1P62166 190 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 H2BFWTQ7Z2G1 175 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 TBC1D26Q86UD7 250 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 OR1P1Q8NH06 330 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 OR4A16Q8NH70 328 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 MISP3Q96FF7 219 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 CMTM3Q96MX0 182 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 UBQLN2Q9UHD9 624 aa10.91□□□□□ -0.66
SHMT2-235ENST00000557740 OR4C46A6NHA9 309 aa10.9□□□□□ -0.66
SHMT2-235ENST00000557740 NUPL2O15504 423 aaKnown RBP10.9□□□□□ -0.66
SHMT2-235ENST00000557740 ZNF207O43670 478 aaKnown RBP10.9□□□□□ -0.66
SHMT2-235ENST00000557740 ADMP35318 185 aa10.9□□□□□ -0.66
SHMT2-235ENST00000557740 VBP1P61758 197 aa10.9□□□□□ -0.66
SHMT2-235ENST00000557740 RELQ04864 619 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-235ENST00000557740 SEC22AQ96IW7 307 aa10.9□□□□□ -0.66
SHMT2-235ENST00000557740 FUNDC2Q9BWH2 189 aa10.9□□□□□ -0.66
SHMT2-235ENST00000557740 LYSTQ99698 3801 aa10.9□□□□□ -0.67
SHMT2-235ENST00000557740 DBX1A6NMT0 343 aa10.89□□□□□ -0.67
SHMT2-235ENST00000557740 C15orf62A8K5M9 175 aa10.89□□□□□ -0.67
SHMT2-235ENST00000557740 F8W735 103 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-235ENST00000557740 K7EMT4 169 aa10.89□□□□□ -0.67
SHMT2-235ENST00000557740 UCP3P55916 312 aa10.89□□□□□ -0.67
SHMT2-235ENST00000557740 MRGPRFQ96AM1 343 aa10.89□□□□□ -0.67
SHMT2-235ENST00000557740 FAM25AB3EWG3 89 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 FAM25CB3EWG5 89 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 FAM25GB3EWG6 89 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 M0QYG6 137 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 UBE2CO00762 179 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 HPGDSO60760 199 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 YIF1AO95070 293 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 PGAM2P15259 253 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 ELK1P19419 428 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 MFAP4P55083 255 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 PRCDQ00LT1 54 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 DEFB135Q30KP9 77 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 ODF3L2Q3SX64 289 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 RNASE12Q5GAN4 147 aaKnown RBP10.88□□□□□ -0.67
SHMT2-235ENST00000557740 TP53TG1Q9Y2A0 90 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 SACSQ9NZJ4 4579 aa10.88□□□□□ -0.67
SHMT2-235ENST00000557740 CXorf65A6NEN9 183 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 SPRY2O43597 315 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 MT-CO2P00403 227 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 IGKV1-39P01597 117 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 IGKV1D-39P04432 117 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 CTSDP07339 412 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-235ENST00000557740 CTSGP08311 255 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 RORCP51449 518 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 RNASE10Q5GAN6 216 aaKnown RBP10.87□□□□□ -0.67
SHMT2-235ENST00000557740 MZT2AQ6P582 158 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 Q6ZWC4 215 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 STPG3Q8N7X2 389 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 ZNF114Q8NC26 417 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 TMEM116Q8NCL8 245 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 AP3S1Q92572 193 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 PINX1Q96BK5 328 aaKnown RBP10.87□□□□□ -0.67
SHMT2-235ENST00000557740 TXN2Q99757 166 aa10.87□□□□□ -0.67
SHMT2-235ENST00000557740 C6orf62Q9GZU0 229 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-235ENST00000557740 KIR2DL5BA0A0G2JN68 375 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 KIR2DL5BA0A0G2JPC4 375 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 IGHV7-4-1A0A0J9YVY3 117 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 A0A0J9YWU9 116 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 I3L2K1 104 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 GNG7O60262 68 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 RPL35AP18077 110 aaKnown RBP10.86□□□□□ -0.67
SHMT2-235ENST00000557740 FCGR2BP31994 310 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-235ENST00000557740 BMI1P35226 326 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 AKR1C2P52895 323 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 HSPE1P61604 102 aaKnown RBP10.86□□□□□ -0.67
SHMT2-235ENST00000557740 ERHP84090 104 aaKnown RBP10.86□□□□□ -0.67
SHMT2-235ENST00000557740 PMS2P11Q13670 270 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 LYG2Q86SG7 212 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 WFDC3Q8IUB2 231 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 KIR2DL5AQ8N109 375 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 SLC35G3Q8N808 338 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 KIR2DL5BQ8NHK3 375 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 ZNF486Q96H40 463 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-235ENST00000557740 RHPN1-AS1Q9BWJ2 59 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 SMPXQ9UHP9 88 aa10.86□□□□□ -0.67
SHMT2-235ENST00000557740 ATG12O94817 140 aa10.85□□□□□ -0.67
SHMT2-235ENST00000557740 IGHV3-48P01763 117 aa10.85□□□□□ -0.67
SHMT2-235ENST00000557740 RND3P61587 244 aa10.85□□□□□ -0.67
SHMT2-235ENST00000557740 TNFRSF9Q07011 255 aa10.85□□□□□ -0.67
SHMT2-235ENST00000557740 SPINK9Q5DT21 86 aa10.85□□□□□ -0.67
SHMT2-235ENST00000557740 GALNT14Q96FL9 552 aa10.85□□□□□ -0.67
SHMT2-235ENST00000557740 OR10C1Q96KK4 312 aa10.85□□□□□ -0.67
SHMT2-235ENST00000557740 RNF2Q99496 336 aa10.85□□□□□ -0.67
SHMT2-235ENST00000557740 GINS3Q9BRX5 216 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms