RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 ZNF355PQ9NSJ1 428 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 GSKIPQ9P0R6 139 aa9.98□□□□□ -0.81
SHMT2-227ENST00000557269 TCRBV4S1A1TA0A5B7 111 aa9.97□□□□□ -0.81
SHMT2-227ENST00000557269 C5orf51A6NDU8 294 aa9.97□□□□□ -0.81
SHMT2-227ENST00000557269 CEBPZOSA8MTT3 80 aa9.97□□□□□ -0.81
SHMT2-227ENST00000557269 INS-IGF2F8WCM5 200 aa9.97□□□□□ -0.81
SHMT2-227ENST00000557269 SSNA1O43805 119 aa9.97□□□□□ -0.81
SHMT2-227ENST00000557269 HOXA1P49639 335 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-227ENST00000557269 ID3Q02535 119 aa9.97□□□□□ -0.81
SHMT2-227ENST00000557269 COMMD1Q8N668 190 aa9.97□□□□□ -0.81
SHMT2-227ENST00000557269 ZBTB8BQ8NAP8 495 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-227ENST00000557269 P2RX4Q99571 388 aa9.97□□□□□ -0.81
SHMT2-227ENST00000557269 IGLV11-55A0A075B6I3 123 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 TRBV9A0A0B4J1U6 114 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 A0A1W2PRX2 142 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 OR2J3O76001 311 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 NDUFB8O95169 186 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 BRI3O95415 125 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 TRGV3P03979 118 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 H2BFSP57053 126 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 TPPP2P59282 170 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 IL15RAQ13261 267 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 KLK9Q2XQG4 91 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 TMEM65Q6PI78 240 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 GSG1LQ6UXU4 331 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 HSD17B13Q7Z5P4 300 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-227ENST00000557269 ZNF491Q8N8L2 437 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 TMEM170AQ8WVE7 144 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 C2orf50Q96LR7 162 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 GNB4Q9HAV0 340 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 KLK9Q9UKQ9 250 aa9.96□□□□□ -0.82
SHMT2-227ENST00000557269 H3BUA1 57 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 MBPP02686 304 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-227ENST00000557269 RNASE2P10153 161 aaKnown RBP9.95□□□□□ -0.82
SHMT2-227ENST00000557269 IAPPP10997 89 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 DEFA4P12838 97 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 CXCL3P19876 107 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 NKX2-1P43699 371 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-227ENST00000557269 POLR2GP62487 172 aaKnown RBP eCLIP9.95□□□□□ -0.82
SHMT2-227ENST00000557269 RPL23AP62750 156 aaKnown RBP9.95□□□□□ -0.82
SHMT2-227ENST00000557269 ERHP84090 104 aaKnown RBP9.95□□□□□ -0.82
SHMT2-227ENST00000557269 RHOGP84095 191 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 FCN2Q15485 313 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 BSXQ3C1V8 233 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 KHDC1LQ5JSQ8 128 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 ZNF114Q8NC26 417 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 OR11H7Q8NGC8 314 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 DTD1Q8TEA8 209 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 OR5B12Q96R08 314 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 HEYLQ9NQ87 328 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-227ENST00000557269 MGAT4CQ9UBM8 478 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 F11RQ9Y624 299 aaKnown RBP9.95□□□□□ -0.82
SHMT2-227ENST00000557269 S4R3C0 116 aa9.95□□□□□ -0.82
SHMT2-227ENST00000557269 STAB1Q9NY15 2570 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 FAM90A26D6RGX4 464 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 SYNGR2O43760 224 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 TMEM50AO95807 157 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 SCGB1D2O95969 90 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 IGHV3-11P01762 117 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 NSUN5P1Q3KNT7 163 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 PVRIGQ6DKI7 326 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 SLC25A24Q6NUK1 477 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 SHISA2Q6UWI4 295 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 OR1P1Q8NH06 330 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 SLA2Q9H6Q3 261 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 ENY2Q9NPA8 101 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 FBXL7Q9UJT9 491 aa9.94□□□□□ -0.82
SHMT2-227ENST00000557269 RCL1Q9Y2P8 373 aaKnown RBP9.94□□□□□ -0.82
SHMT2-227ENST00000557269 TSSC4Q9Y5U2 329 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-227ENST00000557269 IGHV3-21A0A0B4J1V1 117 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 WRBO00258 174 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 IGHV3-23P01764 117 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 SNCAP37840 140 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 CDX1P47902 265 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-227ENST00000557269 PAX9P55771 341 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 Q6ZNX1 250 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 NDUFA11Q86Y39 141 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 MRPL41Q8IXM3 137 aaKnown RBP9.93□□□□□ -0.82
SHMT2-227ENST00000557269 NECAP1Q8NC96 275 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 UBE2E2Q96LR5 201 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 MED28Q9H204 178 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 HIPK2Q9H2X6 1198 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 ZFP57Q9NU63 452 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 CACFD1Q9UGQ2 172 aa9.93□□□□□ -0.82
SHMT2-227ENST00000557269 MFSD2BA6NFX1 497 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 FAM223BA6NKX1 122 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 K7EIM0 57 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 K7EPK0 472 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 SSSCA1O60232 199 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 MED6O75586 246 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 ATP5G2Q06055 141 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 RAB32Q13637 225 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 MLANAQ16655 118 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 DEFB136Q30KP8 78 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 C15orf32Q32M92 178 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 C8orf86Q6ZUL3 223 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 FAM223AQ8IWN6 122 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 KLHL30-AS1Q8NEE0 82 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 SLC24A4Q8NFF2 622 aa9.92□□□□□ -0.82
SHMT2-227ENST00000557269 SPATA3Q8NHX4 192 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms