RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 ODAMA1E959 279 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 OOEPA6NGQ2 149 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 C15orf62A8K5M9 175 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 FNDC10F2Z333 226 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 H0YJW9 148 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 M0R2Z0 102 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 NDUFS8O00217 210 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 SYNGR1O43759 233 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 ZG16O60844 167 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 RAMP3O60896 148 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 HSBP1O75506 76 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 NEURL1O76050 574 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 TNFSF15O95150 251 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 IGHEP01854 428 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 CA3P07451 260 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 P0C879 139 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 PATE4P0C8F1 98 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 B4GALT1P15291 398 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 NTF3P20783 257 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 CCNOP22674 350 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 SRIP30626 198 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 CEACAM8P31997 349 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 KIR2DS2P43631 304 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 SSR4P51571 173 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 CLDN18P56856 261 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 TMPRSS3P57727 454 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 TAS2R45P59539 299 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 ERVK-16P61578 105 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 UBE2G1P62253 170 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 RPL31P62899 125 aaKnown RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 ARG2P78540 354 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 ZNF816Q0VGE8 651 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 RAB30Q15771 203 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 SPATA46Q5T0L3 261 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 SLC35E4Q6ICL7 350 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 FAM71F2Q6NXP2 309 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 SLC25A34Q6PIV7 304 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 TRAT1Q6PIZ9 186 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 FBXO46Q6PJ61 603 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 C9orf47Q6ZRZ4 202 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 GTF2H5Q6ZYL4 71 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 BATF2Q8N1L9 274 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 SMRP1Q8NCR6 262 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 OR8B3Q8NGG8 313 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 OR4A16Q8NH70 328 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 OR1L1Q8NH94 360 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 WIPF2Q8TF74 440 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 GLMPQ8WWB7 406 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 BADQ92934 168 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 CHCHD1Q96BP2 118 aaKnown RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 GALMQ96C23 342 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 AP1S3Q96PC3 154 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 OR2V2Q96R30 315 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 OR8B2Q96RD0 313 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 HSD17B10Q99714 261 aaKnown RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 TMEM70Q9BUB7 260 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 DERL1Q9BUN8 251 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 C19orf24Q9BVV8 132 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 RTL8AQ9BWD3 113 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 GGTLC1Q9BX51 225 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 TM2D2Q9BX73 214 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 CLEC7AQ9BXN2 247 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 SRXN1Q9BYN0 137 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 TMEM191AQ9H0A3 160 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 FAM234AQ9H0X4 552 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 SAP30LQ9HAJ7 183 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 HES4Q9HCC6 221 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 NPVFQ9HCQ7 196 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 ENY2Q9NPA8 101 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 OCIAD1Q9NX40 245 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 TECRQ9NZ01 308 aaKnown RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 IL36RNQ9UBH0 155 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 PEF1Q9UBV8 284 aaKnown RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 RARRES3Q9UL19 164 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 POLDIP2Q9Y2S7 368 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 PPIAL4AQ9Y536 164 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 YTHDF2Q9Y5A9 579 aaKnown RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 CHCHD2Q9Y6H1 151 aaPredicted RBP2.36□□□□□ -2.03
SLIRP-208ENST00000556956 V9GYV3 84 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 NINQ8N4C6 2090 aa2.36□□□□□ -2.03
SLIRP-208ENST00000556956 CENPFP49454 3210 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 LOC102723996A0A087X1L8 192 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 IGHV1OR15-9A0A0B4J2B8 117 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 A0A1W2PR80 420 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 A0A1W2PRE2 83 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 C5orf49A4QMS7 147 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 PGPEP1LA6NFU8 196 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 ZNF716A6NP11 495 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 C17orf98A8MV24 154 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 F2Z2F3 143 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 K7EN84 100 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 BMPR1BO00238 502 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 TAX1BP3O14907 124 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 CXCL13O43927 109 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 MRPL33O75394 65 aaKnown RBP2.35□□□□□ -2.03
SLIRP-208ENST00000556956 SCRG1O75711 98 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 OR2J3O76001 311 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 WISP2O76076 250 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 OR2H2O95918 312 aa2.35□□□□□ -2.03
SLIRP-208ENST00000556956 NGFP01138 241 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms