RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 MYOD1P15172 320 aa17.6■□□□□ 0.41
CDKN3-208ENST00000555837 SUB1P53999 127 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDKN3-208ENST00000555837 KLF5Q13887 457 aaPredicted RBP17.6■□□□□ 0.41
CDKN3-208ENST00000555837 CNPY1Q3B7I2 92 aa17.6■□□□□ 0.41
CDKN3-208ENST00000555837 SLC25A24Q6NUK1 477 aa17.6■□□□□ 0.41
CDKN3-208ENST00000555837 SLC35G3Q8N808 338 aa17.6■□□□□ 0.41
CDKN3-208ENST00000555837 GLYATL2Q8WU03 294 aa17.6■□□□□ 0.41
CDKN3-208ENST00000555837 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.6■□□□□ 0.41
CDKN3-208ENST00000555837 F11RQ9Y624 299 aaKnown RBP17.6■□□□□ 0.41
CDKN3-208ENST00000555837 CMYA5Q8N3K9 4069 aa17.6■□□□□ 0.41
CDKN3-208ENST00000555837 AKR1C4P17516 323 aa17.59■□□□□ 0.41
CDKN3-208ENST00000555837 SNCAP37840 140 aa17.59■□□□□ 0.41
CDKN3-208ENST00000555837 RBMS2Q15434 407 aaKnown RBP17.59■□□□□ 0.41
CDKN3-208ENST00000555837 TMEM128Q5BJH2 165 aa17.59■□□□□ 0.41
CDKN3-208ENST00000555837 OR10W1Q8NGF6 305 aa17.59■□□□□ 0.41
CDKN3-208ENST00000555837 OR1P1Q8NH06 330 aa17.59■□□□□ 0.41
CDKN3-208ENST00000555837 MRAPQ8TCY5 172 aa17.59■□□□□ 0.41
CDKN3-208ENST00000555837 AURKAIP1Q9NWT8 199 aaPredicted RBP17.59■□□□□ 0.41
CDKN3-208ENST00000555837 TMEM56-RWDD3S4R434 201 aa17.59■□□□□ 0.41
CDKN3-208ENST00000555837 WT1-ASQ06250 92 aa17.58■□□□□ 0.4
CDKN3-208ENST00000555837 FAM106AQ4KMX7 169 aa17.58■□□□□ 0.4
CDKN3-208ENST00000555837 OR9G4Q8NGQ1 327 aa17.58■□□□□ 0.4
CDKN3-208ENST00000555837 S100ZQ8WXG8 99 aa17.58■□□□□ 0.4
CDKN3-208ENST00000555837 BATF3Q9NR55 127 aa17.58■□□□□ 0.4
CDKN3-208ENST00000555837 NDUFB8O95169 186 aa17.57■□□□□ 0.4
CDKN3-208ENST00000555837 IGKV1-5P01602 117 aa17.57■□□□□ 0.4
CDKN3-208ENST00000555837 TMEM268Q5VZI3 342 aa17.57■□□□□ 0.4
CDKN3-208ENST00000555837 LGI3Q8N145 548 aa17.57■□□□□ 0.4
CDKN3-208ENST00000555837 DUXBA0A1W2PPF3 345 aa17.56■□□□□ 0.4
CDKN3-208ENST00000555837 INS-IGF2F8WCM5 200 aa17.56■□□□□ 0.4
CDKN3-208ENST00000555837 CORTO00230 105 aa17.56■□□□□ 0.4
CDKN3-208ENST00000555837 ARL3P36405 182 aa17.56■□□□□ 0.4
CDKN3-208ENST00000555837 SYNJ2BPP57105 145 aa17.56■□□□□ 0.4
CDKN3-208ENST00000555837 UBE2MP61081 183 aaKnown RBP17.56■□□□□ 0.4
CDKN3-208ENST00000555837 TMED4Q7Z7H5 227 aa17.56■□□□□ 0.4
CDKN3-208ENST00000555837 OR2C3Q8N628 320 aa17.56■□□□□ 0.4
CDKN3-208ENST00000555837 ZNF114Q8NC26 417 aa17.56■□□□□ 0.4
CDKN3-208ENST00000555837 OR52E5Q8NH55 327 aa17.56■□□□□ 0.4
CDKN3-208ENST00000555837 SIGLEC8Q9NYZ4 499 aa17.56■□□□□ 0.4
CDKN3-208ENST00000555837 P0C879 139 aa17.55■□□□□ 0.4
CDKN3-208ENST00000555837 SPCS3P61009 180 aa17.55■□□□□ 0.4
CDKN3-208ENST00000555837 DEFA5Q01523 94 aa17.55■□□□□ 0.4
CDKN3-208ENST00000555837 SPSB3Q6PJ21 355 aa17.55■□□□□ 0.4
CDKN3-208ENST00000555837 CLEC19AQ6UXS0 136 aa17.55■□□□□ 0.4
CDKN3-208ENST00000555837 GPHB5Q86YW7 130 aa17.55■□□□□ 0.4
CDKN3-208ENST00000555837 SELENOHQ8IZQ5 122 aaKnown RBP17.55■□□□□ 0.4
CDKN3-208ENST00000555837 CENPSQ8N2Z9 138 aa17.55■□□□□ 0.4
CDKN3-208ENST00000555837 ZNF256Q9Y2P7 627 aaPredicted RBP17.55■□□□□ 0.4
CDKN3-208ENST00000555837 A0A0B4J293 547 aa17.54■□□□□ 0.4
CDKN3-208ENST00000555837 A0A0B4J2A0 478 aa17.54■□□□□ 0.4
CDKN3-208ENST00000555837 HOXA1P49639 335 aaPredicted RBP17.54■□□□□ 0.4
CDKN3-208ENST00000555837 PALMDQ9NP74 551 aa17.54■□□□□ 0.4
CDKN3-208ENST00000555837 SHPKQ9UHJ6 478 aa17.54■□□□□ 0.4
CDKN3-208ENST00000555837 LGALS9O00182 355 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 BMPR1BO00238 502 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 ST8SIA3O43173 380 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 SCGB2A1O75556 95 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 CLEC3BP05452 202 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 SULT1A3P0DMM9 295 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 SULT1A4P0DMN0 295 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 TMEM187Q14656 261 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 PLET1Q6UQ28 207 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 NOXA1Q86UR1 476 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 BSCL2Q96G97 398 aaPredicted RBP17.53■□□□□ 0.4
CDKN3-208ENST00000555837 TXN2Q99757 166 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 CCDC32Q9BV29 185 aa17.53■□□□□ 0.4
CDKN3-208ENST00000555837 DBX1A6NMT0 343 aa17.52■□□□□ 0.4
CDKN3-208ENST00000555837 VAMP1P23763 118 aa17.52■□□□□ 0.4
CDKN3-208ENST00000555837 CCR6P51684 374 aa17.52■□□□□ 0.4
CDKN3-208ENST00000555837 KRTAP10-11P60412 298 aa17.52■□□□□ 0.4
CDKN3-208ENST00000555837 BAK1Q16611 211 aa17.52■□□□□ 0.4
CDKN3-208ENST00000555837 AARDQ4LEZ3 155 aa17.52■□□□□ 0.4
CDKN3-208ENST00000555837 DEFB121Q5J5C9 76 aa17.52■□□□□ 0.4
CDKN3-208ENST00000555837 ZNF502Q8TBZ5 544 aa17.52■□□□□ 0.4
CDKN3-208ENST00000555837 TMEM230Q96A57 120 aa17.52■□□□□ 0.4
CDKN3-208ENST00000555837 C21orf62Q9NYP8 219 aa17.52■□□□□ 0.4
CDKN3-208ENST00000555837 A6NHS1 94 aa17.51■□□□□ 0.39
CDKN3-208ENST00000555837 LY86O95711 162 aa17.51■□□□□ 0.39
CDKN3-208ENST00000555837 TRBV12-3P01733 135 aa17.51■□□□□ 0.39
CDKN3-208ENST00000555837 IL7P13232 177 aa17.51■□□□□ 0.39
CDKN3-208ENST00000555837 OR2K2Q8NGT1 345 aa17.51■□□□□ 0.39
CDKN3-208ENST00000555837 HIPK2Q9H2X6 1198 aa17.51■□□□□ 0.39
CDKN3-208ENST00000555837 PRB2P02812 416 aaPredicted RBP17.5■□□□□ 0.39
CDKN3-208ENST00000555837 HTR2BP41595 481 aa17.5■□□□□ 0.39
CDKN3-208ENST00000555837 C19orf35Q6ZS72 473 aa17.5■□□□□ 0.39
CDKN3-208ENST00000555837 CCDC140Q96MF4 163 aa17.5■□□□□ 0.39
CDKN3-208ENST00000555837 CACNG5Q9UF02 275 aa17.5■□□□□ 0.39
CDKN3-208ENST00000555837 MFSD2BA6NFX1 497 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 PPP5D1E7EU14 171 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 NDUFB6O95139 128 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 GPR183P32249 361 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 MFAP4P55083 255 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 LCN12Q6JVE5 192 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 LHFPL5Q8TAF8 219 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 SCARB1Q8WTV0 552 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 MARC2Q969Z3 335 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 MISP3Q96FF7 219 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 HEYLQ9NQ87 328 aaPredicted RBP17.49■□□□□ 0.39
CDKN3-208ENST00000555837 PTTG2Q9NZH5 202 aa17.49■□□□□ 0.39
CDKN3-208ENST00000555837 A0A1B0GU03 582 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms