RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 IGHV2-70P01814 119 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 APOA2P02652 100 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 CGB3P0DN86 165 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 CGB7P0DN87 165 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 GATA3P23771 443 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 NFYBP25208 207 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 MAS1LP35410 378 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 HOXA1P49639 335 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-216ENST00000554975 PSMB3P49720 205 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 RELBQ01201 579 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 ARL16Q0P5N6 197 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 AKIRIN2Q53H80 203 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 DDB2Q92466 427 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 LHX4Q969G2 390 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 HIST1H2BAQ96A08 127 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 NEIL1Q96FI4 390 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-216ENST00000554975 TCEAL7Q9BRU2 100 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 TMEM140Q9NV12 185 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 PRNDQ9UKY0 176 aa8.99□□□□□ -0.97
SHMT2-216ENST00000554975 FOXA2Q9Y261 457 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-216ENST00000554975 PUS1Q9Y606 427 aaKnown RBP eCLIP8.99□□□□□ -0.97
SHMT2-216ENST00000554975 IGHV3OR16-10A0A075B7F0 116 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 SMCO3A2RU48 225 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 C15orf62A8K5M9 175 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 COLCA2A8K830 154 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 PMS2P5A8MQ11 134 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 TMEM178BH3BS89 294 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 M0QZ24 198 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 S100A6P06703 90 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 ELLP55199 621 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-216ENST00000554975 RAB31Q13636 194 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 LTC4SQ16873 150 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 SMUG1Q53HV7 270 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 FFAR4Q5NUL3 377 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 NCR3LG1Q68D85 454 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 CYB561D1Q8N8Q1 229 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 ZNRF1Q8ND25 227 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 NPCDR1Q9BY65 106 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 CTDSP1Q9GZU7 261 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 HEYLQ9NQ87 328 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-216ENST00000554975 FKBP11Q9NYL4 201 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 RPUSD1Q9UJJ7 312 aaKnown RBP8.98□□□□□ -0.97
SHMT2-216ENST00000554975 WDR83OSQ9Y284 106 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 ZNF257Q9Y2Q1 563 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 COL7A1Q02388 2944 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 DNAH3Q8TD57 4116 aa8.98□□□□□ -0.97
SHMT2-216ENST00000554975 PPIAL4EA0A075B759 164 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 SAA2-SAA4A0A096LPE2 208 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 ZFP92A6NM28 416 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 PPIAL4DF5H284 164 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 NDUFA2O43678 99 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 FOXH1O75593 365 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 OR2C1O95371 312 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 IFNA10P01566 189 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 CRYBA1P05813 215 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 SAA2P0DJI9 122 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-216ENST00000554975 PPIAL4FP0DN26 164 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 IGHV4-38-2P0DP08 117 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 RAB5AP20339 215 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 CDC34P49427 236 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-216ENST00000554975 MEF2BQ02080 365 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-216ENST00000554975 C17orf58Q2M2W7 97 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 TMEM155Q4W5P6 130 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 FAM201AQ5SY85 155 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 LCN15Q6UWW0 184 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 SLC25A48Q6ZT89 311 aaKnown RBP8.97□□□□□ -0.97
SHMT2-216ENST00000554975 C8orf31Q8N9H6 132 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 ZNF439Q8NDP4 499 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 OR10G9Q8NGN4 311 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 OR10G7Q8NGN6 311 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 DCTN5Q9BTE1 182 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 PATZ1Q9HBE1 687 aaKnown RBP8.97□□□□□ -0.97
SHMT2-216ENST00000554975 TMEM242Q9NWH2 141 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 TCF19Q9Y242 345 aa8.97□□□□□ -0.97
SHMT2-216ENST00000554975 TET2Q6N021 2002 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-216ENST00000554975 MEX3AA1L020 520 aaKnown RBP8.96□□□□□ -0.98
SHMT2-216ENST00000554975 FAM181BA6NEQ2 426 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 SEC14L6B5MCN3 397 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 G3V4G9 280 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 S100A8P05109 93 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 OR9G9P0C7N8 305 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 NPY1RP25929 384 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 IL3RAP26951 378 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 CD1BP29016 333 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 OPRK1P41145 380 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 BRWD1-AS2P59051 145 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 CCL20P78556 96 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 BEAN1Q3B7T3 259 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 LRRC10Q5BKY1 277 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 ETV3LQ6ZN32 361 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 CYP2G1PQ6ZSU1 146 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 MRPL41Q8IXM3 137 aaKnown RBP8.96□□□□□ -0.98
SHMT2-216ENST00000554975 LYG1Q8N1E2 194 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 SLC24A4Q8NFF2 622 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 OR13D1Q8NGV5 346 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 VSTM2AQ8TAG5 236 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 OSR1Q8TAX0 266 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-216ENST00000554975 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 BTF3L4Q96K17 158 aa8.96□□□□□ -0.98
SHMT2-216ENST00000554975 RHOVQ96L33 236 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms