RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TET2Q6N021 2002 aaPredicted RBP12.85□□□□□ -0.35
SPTLC2-203ENST00000554901 SYNGR2O43760 224 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 DEFA4P12838 97 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 SNCAP37840 140 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 HTR2BP41595 481 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 SUB1P53999 127 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 RRAS2P62070 204 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 IL15RAQ13261 267 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 C12orf54Q6X4T0 127 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 Q6ZNX1 250 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 NOXA1Q86UR1 476 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 OR1P1Q8NH06 330 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 ASB13Q8WXK3 278 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 ZNF747Q9BV97 191 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 RBKSQ9H477 322 aa12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 HEYLQ9NQ87 328 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-203ENST00000554901 TRBV9A0A0B4J1U6 114 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 WRBO00258 174 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 PF4V1P10720 104 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 RAB9AP51151 201 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 CD83Q01151 205 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 SRSF4Q08170 494 aaKnown RBP12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 BSXQ3C1V8 233 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 SPINK9Q5DT21 86 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 C10orf99Q6UWK7 81 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 MYOZ3Q8TDC0 251 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 ZNF355PQ9NSJ1 428 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 THYN1Q9P016 225 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 U3KQ87 197 aa12.83□□□□□ -0.35
SPTLC2-203ENST00000554901 FAM223BA6NKX1 122 aa12.83□□□□□ -0.36
SPTLC2-203ENST00000554901 NXPH3O95157 252 aa12.83□□□□□ -0.36
SPTLC2-203ENST00000554901 H2BFSP57053 126 aa12.83□□□□□ -0.36
SPTLC2-203ENST00000554901 FAM223AQ8IWN6 122 aa12.83□□□□□ -0.36
SPTLC2-203ENST00000554901 NECAP1Q8NC96 275 aa12.83□□□□□ -0.36
SPTLC2-203ENST00000554901 USMG5Q96IX5 58 aa12.83□□□□□ -0.36
SPTLC2-203ENST00000554901 RAB40CQ96S21 281 aa12.83□□□□□ -0.36
SPTLC2-203ENST00000554901 P2RX4Q99571 388 aa12.83□□□□□ -0.36
SPTLC2-203ENST00000554901 IGLV11-55A0A075B6I3 123 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 A0A0G2JLM5 398 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 SIX6O95475 246 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 MBPP02686 304 aaPredicted RBP12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 TRGV3P03979 118 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 REG1AP05451 166 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 TAS2R30P59541 319 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 RPP30P78346 268 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 FCN2Q15485 313 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 TCTEX1D4Q5JR98 221 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 PVRIGQ6DKI7 326 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 C3orf56Q8N813 242 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 SLC24A4Q8NFF2 622 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 FANCD2OSQ96PS1 177 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 CITED1Q99966 193 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 KLK15Q9H2R5 256 aa12.82□□□□□ -0.36
SPTLC2-203ENST00000554901 TENM1Q9UKZ4 2725 aa12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 CORTO00230 105 aa12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 SCGB1D2O95969 90 aa12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 RNASE2P10153 161 aaKnown RBP12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 CD28P10747 220 aa12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 CDX1P47902 265 aaPredicted RBP12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 TPPP2P59282 170 aa12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 POLR2GP62487 172 aaKnown RBP eCLIP12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 C2orf83Q53S99 150 aa12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 UBE2E2Q96LR5 201 aa12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 MDFIQ99750 246 aa12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 MAGT1Q9H0U3 335 aa12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 TSSC4Q9Y5U2 329 aaPredicted RBP12.81□□□□□ -0.36
SPTLC2-203ENST00000554901 RPLP1P05386 114 aaKnown RBP12.8□□□□□ -0.36
SPTLC2-203ENST00000554901 CXCL3P19876 107 aa12.8□□□□□ -0.36
SPTLC2-203ENST00000554901 KRTAP10-3P60369 221 aa12.8□□□□□ -0.36
SPTLC2-203ENST00000554901 RHOGP84095 191 aa12.8□□□□□ -0.36
SPTLC2-203ENST00000554901 FAM209BQ5JX69 171 aa12.8□□□□□ -0.36
SPTLC2-203ENST00000554901 SHISA2Q6UWI4 295 aa12.8□□□□□ -0.36
SPTLC2-203ENST00000554901 SMIM8Q96KF7 97 aa12.8□□□□□ -0.36
SPTLC2-203ENST00000554901 MS4A10Q96PG2 267 aa12.8□□□□□ -0.36
SPTLC2-203ENST00000554901 RCL1Q9Y2P8 373 aaKnown RBP12.8□□□□□ -0.36
SPTLC2-203ENST00000554901 TCRBV4S1A1TA0A5B7 111 aa12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 K7EPK0 472 aa12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 IFNA10P01566 189 aa12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 PVALBP20472 110 aaPredicted RBP12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 NPY1RP25929 384 aa12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 RPL23AP62750 156 aaKnown RBP12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 KIAA0141Q14154 515 aaPredicted RBP12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 SLC25A24Q6NUK1 477 aa12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 NDUFA11Q86Y39 141 aa12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 ZNF491Q8N8L2 437 aa12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 FBXL7Q9UJT9 491 aa12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 DMRT1Q9Y5R6 373 aa12.79□□□□□ -0.36
SPTLC2-203ENST00000554901 STAB1Q9NY15 2570 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 SSSCA1O60232 199 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 TSC22D2O75157 780 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 PRH1P02810 166 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 RLN2P04090 185 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 GIPP09681 153 aaPredicted RBP12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 PET100P0DJ07 73 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 IAPPP10997 89 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 MFAP2P55001 183 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 RAB32Q13637 225 aa12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 EXOSC2Q13868 293 aaKnown RBP12.78□□□□□ -0.36
SPTLC2-203ENST00000554901 RNASEH2CQ8TDP1 164 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms