RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 CKLFQ9UBR5 152 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 C3orf18Q9UK00 162 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 KLK9Q9UKQ9 250 aa0.5□□□□□ -2.33
SCFD1-214ENST00000554819 CACNA1AO00555 2505 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 ANAPC1Q9H1A4 1944 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 A0A1B0GV50 99 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 GOLGA6L19H0YKK7 550 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 FADS1O60427 444 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 HYPMO75409 117 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 MARCKSL1P49006 195 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 SKP1P63208 163 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 C1orf195Q5TG92 126 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 PHF13Q86YI8 300 aaPredicted RBP0.49□□□□□ -2.33
SCFD1-214ENST00000554819 PIGXQ8TBF5 258 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 ZFP30Q9Y2G7 519 aa0.49□□□□□ -2.33
SCFD1-214ENST00000554819 CCDC88AQ3V6T2 1871 aa0.48□□□□□ -2.33
SCFD1-214ENST00000554819 HTR1AP08908 422 aa0.48□□□□□ -2.33
SCFD1-214ENST00000554819 MLLT11Q13015 90 aaPredicted RBP0.48□□□□□ -2.33
SCFD1-214ENST00000554819 GRK1Q15835 563 aa0.48□□□□□ -2.33
SCFD1-214ENST00000554819 SPANXN5Q5MJ07 72 aa0.48□□□□□ -2.33
SCFD1-214ENST00000554819 SCGB3A1Q96QR1 104 aa0.48□□□□□ -2.33
SCFD1-214ENST00000554819 SLC50A1Q9BRV3 221 aa0.48□□□□□ -2.33
SCFD1-214ENST00000554819 UPF3BQ9BZI7 483 aaKnown RBP0.48□□□□□ -2.33
SCFD1-214ENST00000554819 UBR4Q5T4S7 5183 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 TRBV20OR9-2A0A075B6H5 130 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 A0A0J9YY10 115 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 A0A1B0GX78 115 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 ASAH2BP0C7U1 165 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 ZNF93P35789 620 aaPredicted RBP0.47□□□□□ -2.33
SCFD1-214ENST00000554819 SPANXN3Q5MJ09 141 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 CLVS2Q5SYC1 327 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 AADACL3Q5VUY0 350 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 LRRN1Q6UXK5 716 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 Q8N814 137 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 PKD1L2Q7Z442 2459 aa0.47□□□□□ -2.33
SCFD1-214ENST00000554819 RALGAPA2Q2PPJ7 1873 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 IGKV1D-42A0A075B6H8 117 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 OR1I1O60431 355 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 OCM2P0CE71 109 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 COX5BP10606 129 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 FKBP2P26885 142 aaKnown RBP0.46□□□□□ -2.34
SCFD1-214ENST00000554819 BLVRAP53004 296 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 NAA20P61599 178 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 TMED1Q13445 227 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 KISS1Q15726 138 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 OGFRL1Q5TC84 451 aaPredicted RBP0.46□□□□□ -2.34
SCFD1-214ENST00000554819 RPL22L1Q6P5R6 122 aaKnown RBP0.46□□□□□ -2.34
SCFD1-214ENST00000554819 IQCF2Q8IXL9 164 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 LINC00311Q8N616 119 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 ZNF418Q8TF45 676 aaPredicted RBP0.46□□□□□ -2.34
SCFD1-214ENST00000554819 DERL1Q9BUN8 251 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 CISHQ9NSE2 258 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 RIC1Q4ADV7 1423 aa0.46□□□□□ -2.34
SCFD1-214ENST00000554819 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 TOPBP1Q92547 1522 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 A0A0A6YYH2 397 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 A6NJ64 397 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 M0QZ92 97 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 CXCR6O00574 342 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 ACOX3O15254 700 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 OR2T1O43869 369 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 CTSDP07339 412 aaPredicted RBP0.45□□□□□ -2.34
SCFD1-214ENST00000554819 HIST1H2BOP23527 126 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 HIST1H2BBP33778 126 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 HIST1H2BDP58876 126 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 RAB4BP61018 213 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 HIST1H2BCP62807 126 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 PDE6HQ13956 83 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 GUK1Q16774 197 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 HIST2H2BEQ16778 126 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.45□□□□□ -2.34
SCFD1-214ENST00000554819 GDF5OSQ5U4N7 250 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 Q6ZQT0 140 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 Q6ZS49 121 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 OR2T4Q8NH00 348 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 PFN4Q8NHR9 129 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 HIST1H2BHQ93079 126 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 HIST1H2BNQ99877 126 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 HIST1H2BMQ99879 126 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 GINS4Q9BRT9 223 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 WDR61Q9GZS3 305 aaKnown RBP0.45□□□□□ -2.34
SCFD1-214ENST00000554819 FGFR1OP2Q9NVK5 253 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 MACF1Q9UPN3 7388 aaKnown RBP0.45□□□□□ -2.34
SCFD1-214ENST00000554819 USP24Q9UPU5 2620 aa0.45□□□□□ -2.34
SCFD1-214ENST00000554819 PCLOQ9Y6V0 5065 aa0.44□□□□□ -2.34
SCFD1-214ENST00000554819 C2orf70A6NJV1 201 aa0.44□□□□□ -2.34
SCFD1-214ENST00000554819 M0QX08 132 aa0.44□□□□□ -2.34
SCFD1-214ENST00000554819 SPI1P17947 270 aa0.44□□□□□ -2.34
SCFD1-214ENST00000554819 CASQ1P31415 396 aa0.44□□□□□ -2.34
SCFD1-214ENST00000554819 KCNJ8Q15842 424 aa0.44□□□□□ -2.34
SCFD1-214ENST00000554819 DPPA3Q6W0C5 159 aa0.44□□□□□ -2.34
SCFD1-214ENST00000554819 OOSP2Q86WS3 158 aa0.44□□□□□ -2.34
SCFD1-214ENST00000554819 OR4E2Q8NGC2 313 aa0.44□□□□□ -2.34
SCFD1-214ENST00000554819 MRPL30Q8TCC3 161 aaKnown RBP0.44□□□□□ -2.34
SCFD1-214ENST00000554819 COL6A3P12111 3177 aa0.44□□□□□ -2.34
SCFD1-214ENST00000554819 A0A0D9SG52 128 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 EVPLLA8MZ36 301 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 CLDN25C9JDP6 229 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 M0R2N4 97 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 SLC16A4O15374 487 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms