RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 FCGR2BP31994 310 aaPredicted RBP8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 CMC4P56277 68 aaPredicted RBP8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 VBP1P61758 197 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 NCS1P62166 190 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 ERHP84090 104 aaKnown RBP8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 RELQ04864 619 aaPredicted RBP8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 PHLDA2Q53GA4 152 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 ZFAND6Q6FIF0 208 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 BTNL8Q6UX41 500 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 TBC1D26Q86UD7 250 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 SNX29P2Q8IUI4 249 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 SCARB1Q8WTV0 552 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 CACNG8Q8WXS5 425 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 GGTLC1Q9BX51 225 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 FXYD6Q9H0Q3 95 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 RYR3Q15413 4870 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 C15orf62A8K5M9 175 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 FAM25AB3EWG3 89 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 FAM25CB3EWG5 89 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 FAM25GB3EWG6 89 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 NUPL2O15504 423 aaKnown RBP8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 CD5P06127 495 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 ZNF182P17025 639 aaPredicted RBP8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 ELK1P19419 428 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 HSPE1P61604 102 aaKnown RBP8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 Q56UQ5 140 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 ARRDC1Q8N5I2 433 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 ZNF114Q8NC26 417 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 SEC22AQ96IW7 307 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 FAM110AQ9BQ89 295 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 NSG2Q9Y328 171 aa8.15□□□□□ -1.1
VTI1BP3-201ENST00000550220 IGHV3-35A0A0C4DH35 117 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 OR4C46A6NHA9 309 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 K7EIM0 57 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 UBE2CO00762 179 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 HPGDSO60760 199 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 B3GALNT1O75752 331 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 JTBO76095 146 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 EDN2P20800 178 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 BMI1P35226 326 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 APOC4P55056 127 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 MFAP4P55083 255 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 RND3P61587 244 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 PRCDQ00LT1 54 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 RNASE10Q5GAN6 216 aaKnown RBP8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 C20orf24Q9BUV8 137 aa8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 C6orf62Q9GZU0 229 aaPredicted RBP8.14□□□□□ -1.11
VTI1BP3-201ENST00000550220 KIR2DL5BA0A0G2JN68 375 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 KIR2DL5BA0A0G2JPC4 375 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 CTSGP08311 255 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 PGAM2P15259 253 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 SUB1P53999 127 aaKnown RBP eCLIP8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 MFAP2P55001 183 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 SSBP1Q04837 148 aaKnown RBP8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 Q6ZWC4 215 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 KIR2DL5AQ8N109 375 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 CCDC71LQ8N9Z2 235 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 UBAC2Q8NBM4 344 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 KIR2DL5BQ8NHK3 375 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 ZFAND1Q8TCF1 268 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 PDCD10Q9BUL8 212 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 WFDC10AQ9H1F0 79 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 RABL2AQ9UBK7 228 aaPredicted RBP8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 MTFP1Q9UDX5 166 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 RABL2BQ9UNT1 228 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 TP53TG1Q9Y2A0 90 aa8.13□□□□□ -1.11
VTI1BP3-201ENST00000550220 INS-IGF2F8WCM5 200 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 SCGB2A1O75556 95 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 GABARAPO95166 117 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 ADMP35318 185 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 SNCAP37840 140 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 NPBWR1P48145 328 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 PIGPP57054 158 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 TAS2R19P59542 299 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 MRPS10P82664 201 aaKnown RBP8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 CTF1Q16619 201 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 DUSP18Q8NEJ0 188 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 TERB2Q8NHR7 220 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 MRGPRFQ96AM1 343 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 MISP3Q96FF7 219 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 CHRDL1Q9BU40 450 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 RETNQ9HD89 108 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 COPZ2Q9P299 210 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 EXTL2Q9UBQ6 330 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 KLK11Q9UBX7 282 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 SMPXQ9UHP9 88 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 TENM2Q9NT68 2774 aa8.12□□□□□ -1.11
VTI1BP3-201ENST00000550220 TRAV14DV4A0A0A6YYC5 116 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 IGHV3-21A0A0B4J1V1 117 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 DBX1A6NMT0 343 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 F8W735 103 aaPredicted RBP8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 I3L2K1 104 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 M0QYG6 137 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 CORTO00230 105 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 GNG7O60262 68 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 YIF1AO95070 293 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 MT-CO2P00403 227 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 AKR1C2P52895 323 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 PAFAH1B2P68402 229 aa8.11□□□□□ -1.11
VTI1BP3-201ENST00000550220 LHFPL1Q86WI0 220 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms