RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ID3Q02535 119 aa16.42■□□□□ 0.22
CACNB3-210ENST00000548874 HIST2H2BDQ6DRA6 164 aa16.42■□□□□ 0.22
CACNB3-210ENST00000548874 TMEM65Q6PI78 240 aa16.42■□□□□ 0.22
CACNB3-210ENST00000548874 MS4A10Q96PG2 267 aa16.42■□□□□ 0.22
CACNB3-210ENST00000548874 FANCD2OSQ96PS1 177 aa16.42■□□□□ 0.22
CACNB3-210ENST00000548874 RBKSQ9H477 322 aa16.42■□□□□ 0.22
CACNB3-210ENST00000548874 DMRT1Q9Y5R6 373 aa16.42■□□□□ 0.22
CACNB3-210ENST00000548874 F11RQ9Y624 299 aaKnown RBP16.42■□□□□ 0.22
CACNB3-210ENST00000548874 C5orf51A6NDU8 294 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 CEBPZOSA8MTT3 80 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 FAM25EA8MYX2 175 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 GOSR2O14653 212 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 PRH1P02810 166 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 ERHP84090 104 aaKnown RBP16.41■□□□□ 0.22
CACNB3-210ENST00000548874 BSXQ3C1V8 233 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 SHISA2Q6UWI4 295 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 GSG1LQ6UXU4 331 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 C2orf50Q96LR7 162 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 P2RX4Q99571 388 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 ENY2Q9NPA8 101 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 ZNF355PQ9NSJ1 428 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 ZFP57Q9NU63 452 aa16.41■□□□□ 0.22
CACNB3-210ENST00000548874 IGLV11-55A0A075B6I3 123 aa16.4■□□□□ 0.22
CACNB3-210ENST00000548874 TCRBV4S1A1TA0A5B7 111 aa16.4■□□□□ 0.22
CACNB3-210ENST00000548874 ADARB2-AS1A8MUL3 147 aa16.4■□□□□ 0.22
CACNB3-210ENST00000548874 TRGV3P03979 118 aa16.4■□□□□ 0.22
CACNB3-210ENST00000548874 NKX2-1P43699 371 aaPredicted RBP16.4■□□□□ 0.22
CACNB3-210ENST00000548874 MFAP2P55001 183 aa16.4■□□□□ 0.22
CACNB3-210ENST00000548874 IL15RAQ13261 267 aa16.4■□□□□ 0.22
CACNB3-210ENST00000548874 ZNF491Q8N8L2 437 aa16.4■□□□□ 0.22
CACNB3-210ENST00000548874 OR1P1Q8NH06 330 aa16.4■□□□□ 0.22
CACNB3-210ENST00000548874 DTD1Q8TEA8 209 aa16.4■□□□□ 0.22
CACNB3-210ENST00000548874 TSSC4Q9Y5U2 329 aaPredicted RBP16.4■□□□□ 0.22
CACNB3-210ENST00000548874 STAB1Q9NY15 2570 aa16.4■□□□□ 0.22
CACNB3-210ENST00000548874 MED6O75586 246 aa16.39■□□□□ 0.21
CACNB3-210ENST00000548874 DEFA4P12838 97 aa16.39■□□□□ 0.21
CACNB3-210ENST00000548874 HIST1H1BP16401 226 aaKnown RBP16.39■□□□□ 0.21
CACNB3-210ENST00000548874 TPPP2P59282 170 aa16.39■□□□□ 0.21
CACNB3-210ENST00000548874 RPL23AP62750 156 aaKnown RBP16.39■□□□□ 0.21
CACNB3-210ENST00000548874 PVRIGQ6DKI7 326 aa16.39■□□□□ 0.21
CACNB3-210ENST00000548874 C11orf87Q6NUJ2 197 aa16.39■□□□□ 0.21
CACNB3-210ENST00000548874 NDUFA11Q86Y39 141 aa16.39■□□□□ 0.21
CACNB3-210ENST00000548874 OR1L6Q8NGR2 347 aa16.39■□□□□ 0.21
CACNB3-210ENST00000548874 UBE2E2Q96LR5 201 aa16.39■□□□□ 0.21
CACNB3-210ENST00000548874 HEYLQ9NQ87 328 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-210ENST00000548874 GSKIPQ9P0R6 139 aa16.39■□□□□ 0.21
CACNB3-210ENST00000548874 FAM223BA6NKX1 122 aa16.38■□□□□ 0.21
CACNB3-210ENST00000548874 SYNGR2O43760 224 aa16.38■□□□□ 0.21
CACNB3-210ENST00000548874 SIX6O95475 246 aa16.38■□□□□ 0.21
CACNB3-210ENST00000548874 RNASE2P10153 161 aaKnown RBP16.38■□□□□ 0.21
CACNB3-210ENST00000548874 CDX1P47902 265 aaPredicted RBP16.38■□□□□ 0.21
CACNB3-210ENST00000548874 RHOGP84095 191 aa16.38■□□□□ 0.21
CACNB3-210ENST00000548874 FAM223AQ8IWN6 122 aa16.38■□□□□ 0.21
CACNB3-210ENST00000548874 NECAP1Q8NC96 275 aa16.38■□□□□ 0.21
CACNB3-210ENST00000548874 SPATA3Q8NHX4 192 aa16.38■□□□□ 0.21
CACNB3-210ENST00000548874 MAGT1Q9H0U3 335 aa16.38■□□□□ 0.21
CACNB3-210ENST00000548874 MGAT4CQ9UBM8 478 aa16.38■□□□□ 0.21
CACNB3-210ENST00000548874 MBPP02686 304 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-210ENST00000548874 SNCAP37840 140 aa16.37■□□□□ 0.21
CACNB3-210ENST00000548874 H2BFSP57053 126 aa16.37■□□□□ 0.21
CACNB3-210ENST00000548874 POLR2GP62487 172 aaKnown RBP eCLIP16.37■□□□□ 0.21
CACNB3-210ENST00000548874 DEFA5Q01523 94 aa16.37■□□□□ 0.21
CACNB3-210ENST00000548874 USMG5Q96IX5 58 aa16.37■□□□□ 0.21
CACNB3-210ENST00000548874 MED28Q9H204 178 aa16.37■□□□□ 0.21
CACNB3-210ENST00000548874 HIPK2Q9H2X6 1198 aa16.37■□□□□ 0.21
CACNB3-210ENST00000548874 CYB5BO43169 146 aa16.36■□□□□ 0.21
CACNB3-210ENST00000548874 OR2J3O76001 311 aa16.36■□□□□ 0.21
CACNB3-210ENST00000548874 HTR2BP41595 481 aa16.36■□□□□ 0.21
CACNB3-210ENST00000548874 KHDC1LQ5JSQ8 128 aa16.36■□□□□ 0.21
CACNB3-210ENST00000548874 SLC24A4Q8NFF2 622 aa16.36■□□□□ 0.21
CACNB3-210ENST00000548874 CIB3Q96Q77 187 aaPredicted RBP16.36■□□□□ 0.21
CACNB3-210ENST00000548874 GNB4Q9HAV0 340 aa16.36■□□□□ 0.21
CACNB3-210ENST00000548874 FBXL7Q9UJT9 491 aa16.36■□□□□ 0.21
CACNB3-210ENST00000548874 RCL1Q9Y2P8 373 aaKnown RBP16.36■□□□□ 0.21
CACNB3-210ENST00000548874 A0A0G2JLM5 398 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 NDUFB8O95169 186 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 LY86O95711 162 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 SCGB1D2O95969 90 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 IAPPP10997 89 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 FCN2Q15485 313 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 C2orf83Q53S99 150 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 SLC25A24Q6NUK1 477 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 C18orf65Q6ZTR6 163 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 OR11H7Q8NGC8 314 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 TMEM170AQ8WVE7 144 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 NMES1Q9C002 83 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 U3KQ87 197 aa16.35■□□□□ 0.21
CACNB3-210ENST00000548874 WRBO00258 174 aa16.34■□□□□ 0.21
CACNB3-210ENST00000548874 CXCL3P19876 107 aa16.34■□□□□ 0.21
CACNB3-210ENST00000548874 SUB1P53999 127 aaKnown RBP eCLIP16.34■□□□□ 0.21
CACNB3-210ENST00000548874 RRAS2P62070 204 aaPredicted RBP16.34■□□□□ 0.21
CACNB3-210ENST00000548874 CYCSP99999 105 aaKnown RBP16.34■□□□□ 0.21
CACNB3-210ENST00000548874 C15orf32Q32M92 178 aa16.34■□□□□ 0.21
CACNB3-210ENST00000548874 Q6ZNX1 250 aa16.34■□□□□ 0.21
CACNB3-210ENST00000548874 C4orf3Q8WVX3 66 aa16.34■□□□□ 0.21
CACNB3-210ENST00000548874 THYN1Q9P016 225 aa16.34■□□□□ 0.21
CACNB3-210ENST00000548874 A0A1W2PRX2 142 aa16.33■□□□□ 0.2
CACNB3-210ENST00000548874 I3L521 148 aa16.33■□□□□ 0.2
CACNB3-210ENST00000548874 K7EPK0 472 aa16.33■□□□□ 0.2
CACNB3-210ENST00000548874 SSSCA1O60232 199 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms