RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 LYPD6BQ8NI32 183 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 MBD3L1Q8WWY6 194 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 SCRT1Q9BWW7 348 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 SELENOKQ9Y6D0 94 aa11.74□□□□□ -0.53
CACNB3-209ENST00000548860 ZNF729A6NN14 1252 aaPredicted RBP11.73□□□□□ -0.53
CACNB3-209ENST00000548860 NDUFB3O43676 98 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 MMP23AO75900 390 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 LYZP61626 148 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 RPEL1Q2QD12 228 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 DYSFO75923 2080 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 A0A087WWC5 75 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 IFITM10A6NMD0 228 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 TGOLN2O43493 480 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 HSPE1P61604 102 aaKnown RBP11.73□□□□□ -0.53
CACNB3-209ENST00000548860 NRN1LQ496H8 165 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 ETFRF1Q6IPR1 90 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 GSX1Q9H4S2 264 aaPredicted RBP11.73□□□□□ -0.53
CACNB3-209ENST00000548860 CBY1Q9Y3M2 126 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 DMXL2Q8TDJ6 3036 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 PDE6DO43924 150 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 TPPP2P59282 170 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 TAS2R45P59539 299 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 EGLN1Q9GZT9 426 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 ZNF586Q9NXT0 402 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 NCKAP5O14513 1909 aa11.73□□□□□ -0.53
CACNB3-209ENST00000548860 hADV38S2A0JD32 116 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 ADMP35318 185 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 RND2P52198 227 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 TMEM108Q6UXF1 575 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 FAM90A1Q86YD7 464 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 MMD2Q8IY49 270 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 EAF1Q96JC9 268 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-209ENST00000548860 SSBP4Q9BWG4 385 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-209ENST00000548860 ARL2-SNX15V9GYD0 113 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 ARHGAP32A7KAX9 2087 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 TMEM250H0YL14 139 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 CEACAM1P13688 526 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 GNG5P63218 68 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 CT45A1Q5HYN5 189 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 ZNF295-AS1Q8N0V1 137 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 WDR31Q8NA23 367 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 CT45A3Q8NHU0 189 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 MGST2Q99735 147 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 ONECUT1Q9UBC0 465 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 SLC45A2Q9UMX9 530 aa11.72□□□□□ -0.53
CACNB3-209ENST00000548860 MRPS18CQ9Y3D5 142 aaKnown RBP11.72□□□□□ -0.53
CACNB3-209ENST00000548860 SERTM2A0A1B0GWG4 89 aa11.71□□□□□ -0.53
CACNB3-209ENST00000548860 FAM90A26D6RGX4 464 aa11.71□□□□□ -0.53
CACNB3-209ENST00000548860 IGLV2-14P01704 120 aa11.71□□□□□ -0.53
CACNB3-209ENST00000548860 SRIP30626 198 aa11.71□□□□□ -0.53
CACNB3-209ENST00000548860 Q56UQ5 140 aa11.71□□□□□ -0.53
CACNB3-209ENST00000548860 C5orf30Q96GV9 206 aa11.71□□□□□ -0.53
CACNB3-209ENST00000548860 HILPDAQ9Y5L2 63 aa11.71□□□□□ -0.53
CACNB3-209ENST00000548860 FRMD6-AS1P0C7T7 363 aa11.71□□□□□ -0.53
CACNB3-209ENST00000548860 USF1P22415 310 aaPredicted RBP11.71□□□□□ -0.53
CACNB3-209ENST00000548860 LINC01551Q86U37 167 aa11.71□□□□□ -0.53
CACNB3-209ENST00000548860 MRPL20Q9BYC9 149 aaKnown RBP11.71□□□□□ -0.53
CACNB3-209ENST00000548860 YTHDF2Q9Y5A9 579 aaKnown RBP11.71□□□□□ -0.53
CACNB3-209ENST00000548860 RBFOX2O43251 390 aaKnown RBP eCLIP11.71□□□□□ -0.54
CACNB3-209ENST00000548860 SERF1AO75920 110 aa11.71□□□□□ -0.54
CACNB3-209ENST00000548860 LY6HO94772 140 aa11.71□□□□□ -0.54
CACNB3-209ENST00000548860 RAB7AP51149 207 aa11.71□□□□□ -0.54
CACNB3-209ENST00000548860 GGTLC1Q9BX51 225 aa11.71□□□□□ -0.54
CACNB3-209ENST00000548860 KCNIP2Q9NS61 270 aa11.71□□□□□ -0.54
CACNB3-209ENST00000548860 A6NNC1 897 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 STARD4Q96DR4 205 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 NAGKQ9UJ70 344 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 MKRN2OSH3BPM6 223 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 EFNB3Q15768 340 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 GATCO43716 136 aaKnown RBP11.7□□□□□ -0.54
CACNB3-209ENST00000548860 TFPI2P48307 235 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 LGALS4P56470 323 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 ZNF664Q8N3J9 261 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 ST6GALNAC6Q969X2 333 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 C14orf144Q96I85 54 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 RAB9BQ9NP90 201 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 WDR83OSQ9Y284 106 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 CPAMD8Q8IZJ3 1885 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 IGHV2-70P01814 119 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 TNFRSF1AP19438 455 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 LRRC10Q5BKY1 277 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 OR1L4Q8NGR5 311 aa11.7□□□□□ -0.54
CACNB3-209ENST00000548860 NPPCP23582 126 aa11.69□□□□□ -0.54
CACNB3-209ENST00000548860 MBNL3Q9NUK0 354 aaKnown RBP11.69□□□□□ -0.54
CACNB3-209ENST00000548860 NCBP2LA6PVI3 153 aaKnown RBP11.69□□□□□ -0.54
CACNB3-209ENST00000548860 K7EM74 188 aa11.69□□□□□ -0.54
CACNB3-209ENST00000548860 IBA57Q5T440 356 aaKnown RBP11.69□□□□□ -0.54
CACNB3-209ENST00000548860 LPAR2Q9HBW0 351 aa11.69□□□□□ -0.54
CACNB3-209ENST00000548860 PPIAL4AQ9Y536 164 aa11.69□□□□□ -0.54
CACNB3-209ENST00000548860 KLF2Q9Y5W3 355 aaPredicted RBP11.69□□□□□ -0.54
CACNB3-209ENST00000548860 ADGRG4Q8IZF6 3080 aa11.69□□□□□ -0.54
CACNB3-209ENST00000548860 TMEM265A0A087WTH1 108 aa11.69□□□□□ -0.54
CACNB3-209ENST00000548860 PPIHO43447 177 aaKnown RBP11.69□□□□□ -0.54
CACNB3-209ENST00000548860 PGPA6NDG6 321 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 GZMBP10144 247 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 NEUROG1Q92886 237 aa11.68□□□□□ -0.54
CACNB3-209ENST00000548860 SEBOXQ9HB31 216 aaPredicted RBP11.68□□□□□ -0.54
CACNB3-209ENST00000548860 SS18L1O75177 396 aaPredicted RBP11.68□□□□□ -0.54
CACNB3-209ENST00000548860 SAA1P0DJI8 122 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms