RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 CEBPGP53567 150 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 PRSS8Q16651 343 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 AKIRIN2Q53H80 203 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 CTRB2Q6GPI1 263 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 RBMS3Q6XE24 437 aaKnown RBP16.82■□□□□ 0.28
RITA1-201ENST00000548278 C1orf122Q6ZSJ8 110 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 SSMEM1Q8WWF3 244 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 ODF3BA8MYP8 253 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 SNRNP70P08621 437 aaKnown RBP16.82■□□□□ 0.28
RITA1-201ENST00000548278 HTR1DP28221 377 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 KLRD1Q13241 179 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 TMEM144Q7Z5S9 345 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 DPM3Q9P2X0 92 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 PUS1Q9Y606 427 aaKnown RBP eCLIP16.82■□□□□ 0.28
RITA1-201ENST00000548278 SPTAN1Q13813 2472 aaKnown RBP16.81■□□□□ 0.28
RITA1-201ENST00000548278 NAV3Q8IVL0 2385 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 AKR1C3P42330 323 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 RPL29P47914 159 aaKnown RBP16.81■□□□□ 0.28
RITA1-201ENST00000548278 RAB31Q13636 194 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 MMD2Q8IY49 270 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 P2RX4Q99571 388 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 RPS10P5Q9NQ39 176 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 SIGLEC9Q9Y336 463 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 H3BQ15 152 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 B2MP61769 119 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 CD69Q07108 199 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 GAMTQ14353 236 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 MLANAQ16655 118 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 TMEM249Q2WGJ8 235 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 KIR3DL3Q8N743 410 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 STPG3Q8N7X2 389 aa16.81■□□□□ 0.28
RITA1-201ENST00000548278 RHEBQ15382 184 aa16.8■□□□□ 0.28
RITA1-201ENST00000548278 FAM90A2PQ658T7 463 aa16.8■□□□□ 0.28
RITA1-201ENST00000548278 IGKV1OR2-108A0A075B7D4 117 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 TIMM23O14925 209 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 PRR20EP86478 221 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 PRR20CP86479 221 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 PRR20DP86480 221 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 PRR20BP86481 221 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 PRR20AP86496 221 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 SLC35E3Q7Z769 313 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 IGFBPL1Q8WX77 278 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 CACNG8Q8WXS5 425 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 RNF5Q99942 180 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 SMCO4Q9NRQ5 59 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 SLC45A2Q9UMX9 530 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 GPX4P36969 197 aaPredicted RBP16.79■□□□□ 0.28
RITA1-201ENST00000548278 CD81P60033 236 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 PAX2Q02962 417 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 GATAD1Q8WUU5 269 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 MANBALQ9NQG1 85 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 METTL1Q9UBP6 276 aaKnown RBP16.79■□□□□ 0.28
RITA1-201ENST00000548278 DOPEY1Q5JWR5 2465 aa16.79■□□□□ 0.28
RITA1-201ENST00000548278 A0A1W2PPV4 95 aa16.78■□□□□ 0.28
RITA1-201ENST00000548278 IGLC7A0M8Q6 106 aa16.78■□□□□ 0.28
RITA1-201ENST00000548278 GOSR1O95249 250 aa16.78■□□□□ 0.28
RITA1-201ENST00000548278 LINC00869P0C866 280 aa16.78■□□□□ 0.28
RITA1-201ENST00000548278 RNF224P0DH78 156 aa16.78■□□□□ 0.28
RITA1-201ENST00000548278 ATF4P18848 351 aaPredicted RBP16.78■□□□□ 0.28
RITA1-201ENST00000548278 MAS1LP35410 378 aa16.78■□□□□ 0.28
RITA1-201ENST00000548278 TAGLN2P37802 199 aaKnown RBP16.78■□□□□ 0.28
RITA1-201ENST00000548278 PSMB3P49720 205 aa16.78■□□□□ 0.28
RITA1-201ENST00000548278 MEF2BQ02080 365 aaPredicted RBP16.78■□□□□ 0.28
RITA1-201ENST00000548278 VMO1Q7Z5L0 202 aa16.78■□□□□ 0.28
RITA1-201ENST00000548278 LHFPL4Q7Z7J7 247 aa16.78■□□□□ 0.28
RITA1-201ENST00000548278 RNASEH2CQ8TDP1 164 aaKnown RBP16.78■□□□□ 0.28
RITA1-201ENST00000548278 BPESC1Q9GZL8 116 aa16.78■□□□□ 0.28
RITA1-201ENST00000548278 VENTXO95231 258 aa16.77■□□□□ 0.28
RITA1-201ENST00000548278 CEACAM3P40198 252 aa16.77■□□□□ 0.28
RITA1-201ENST00000548278 COMPP49747 757 aaPredicted RBP16.77■□□□□ 0.28
RITA1-201ENST00000548278 TNXAQ16473 311 aa16.77■□□□□ 0.28
RITA1-201ENST00000548278 SLC16A13Q7RTY0 426 aa16.77■□□□□ 0.28
RITA1-201ENST00000548278 CFHR4Q92496 578 aa16.77■□□□□ 0.28
RITA1-201ENST00000548278 HILPDAQ9Y5L2 63 aa16.77■□□□□ 0.28
RITA1-201ENST00000548278 RPL27AP46776 148 aaKnown RBP16.77■□□□□ 0.27
RITA1-201ENST00000548278 SUB1P53999 127 aaKnown RBP eCLIP16.77■□□□□ 0.27
RITA1-201ENST00000548278 LMO4P61968 165 aa16.77■□□□□ 0.27
RITA1-201ENST00000548278 HABP2Q14520 560 aaPredicted RBP16.77■□□□□ 0.27
RITA1-201ENST00000548278 PPP1R27Q86WC6 154 aa16.77■□□□□ 0.27
RITA1-201ENST00000548278 NIPSNAP3BQ9BS92 247 aa16.77■□□□□ 0.27
RITA1-201ENST00000548278 MED13LQ71F56 2210 aa16.76■□□□□ 0.27
RITA1-201ENST00000548278 ACTL6BO94805 426 aa16.76■□□□□ 0.27
RITA1-201ENST00000548278 IGHV4-39P01824 125 aa16.76■□□□□ 0.27
RITA1-201ENST00000548278 LCN2P80188 198 aa16.76■□□□□ 0.27
RITA1-201ENST00000548278 ABHD5Q8WTS1 349 aa16.76■□□□□ 0.27
RITA1-201ENST00000548278 FBXL15Q9H469 300 aa16.76■□□□□ 0.27
RITA1-201ENST00000548278 PRB1P04280 392 aa16.76■□□□□ 0.27
RITA1-201ENST00000548278 OR2T6Q8NHC8 308 aa16.76■□□□□ 0.27
RITA1-201ENST00000548278 TVP23CQ96ET8 276 aa16.76■□□□□ 0.27
RITA1-201ENST00000548278 SIRPDQ9H106 197 aa16.76■□□□□ 0.27
RITA1-201ENST00000548278 FNDC4Q9H6D8 234 aaPredicted RBP16.76■□□□□ 0.27
RITA1-201ENST00000548278 WNK2Q9Y3S1 2297 aa16.75■□□□□ 0.27
RITA1-201ENST00000548278 REG1AP05451 166 aa16.75■□□□□ 0.27
RITA1-201ENST00000548278 STAG3L2P0CL84 134 aa16.75■□□□□ 0.27
RITA1-201ENST00000548278 STAG3L3P0CL85 134 aa16.75■□□□□ 0.27
RITA1-201ENST00000548278 HOXB4P17483 251 aaPredicted RBP16.75■□□□□ 0.27
RITA1-201ENST00000548278 OR10J1P30954 320 aa16.75■□□□□ 0.27
RITA1-201ENST00000548278 PVRIGQ6DKI7 326 aa16.75■□□□□ 0.27
RITA1-201ENST00000548278 SLC35E1Q96K37 410 aa16.75■□□□□ 0.27
RITA1-201ENST00000548278 BBC3Q96PG8 261 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms