RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	THTPA	Q9BU02	230 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	GABARAPL3	Q9BY60	117 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	TMEM191A	Q9H0A3	160 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	GTSF1L	Q9H1H1	148 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	SLC25A22	Q9H936	323 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	EDA2R	Q9HAV5	297 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	FAM49B	Q9NUQ9	324 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	AIG1	Q9NVV5	245 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	CLCF1	Q9UBD9	225 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	NUFIP1	Q9UHK0	495 aa	Known RBP	2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	SLC25A15	Q9Y619	301 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	CHD2	O14647	1828 aa	Known RBP	2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	KDM5D	Q9BY66	1539 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	TRIOBP	Q9H2D6	2365 aa		2.72	□□□□□ -1.97
LGR5-204	ENST00000547310	SMARCA4	P51532	1647 aa		2.71	□□□□□ -1.97
LGR5-204	ENST00000547310	NCAPD3	P42695	1498 aa		2.71	□□□□□ -1.97
LGR5-204	ENST00000547310	MYOM2	P54296	1465 aa		2.71	□□□□□ -1.97
LGR5-204	ENST00000547310	BCORL1	Q5H9F3	1711 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	IGLV3-16	A0A075B6K0	115 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	TRBV6-6	A0A0A6YYG2	114 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	IGHV6-1	A0A0B4J1U7	121 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	ISLR	O14498	428 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	SNAPC5	O75971	98 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	IGLC6	P0CF74	106 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	ZNF728	P0DKX0	622 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	LINC00694	P0DN24	101 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	BTC	P35070	178 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	OPRM1	P35372	400 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	PSMB3	P49720	205 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	SYNJ2BP	P57105	145 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	RPL26	P61254	145 aa	Known RBP	2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	RPS11	P62280	158 aa	Known RBP eCLIP	2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	BTG2	P78543	158 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	ADIG	Q0VDE8	80 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	PYY3	Q5JQD4	70 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	UBE2NL	Q5JXB2	153 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	CLLU1	Q5K131	121 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310		Q6ZS49	121 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	GKN2	Q86XP6	184 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	LINC00337	Q8N6G1	96 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	FNDC9	Q8TBE3	224 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	RPS4Y2	Q8TD47	263 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	DEDD2	Q8WXF8	326 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	FXYD5	Q96DB9	178 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	C2orf50	Q96LR7	162 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	OR4C12	Q96R67	309 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	LINC01587	Q99440	93 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	C1QTNF6	Q9BXI9	259 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	TAS2R8	Q9NYW2	309 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	CCDC167	Q9P0B6	97 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	TAAR3P	Q9P1P4	343 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	CYSLTR1	Q9Y271	337 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	IER3IP1	Q9Y5U9	82 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	ADGB	Q8N7X0	1667 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	ZNFX1	Q9P2E3	1918 aa	Known RBP	2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	PHF3	Q92576	2039 aa	Known RBP	2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	ZNF106	Q9H2Y7	1883 aa	Known RBP	2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	GAPVD1	Q14C86	1478 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	NEO1	Q92859	1461 aa		2.71	□□□□□ -1.98
LGR5-204	ENST00000547310	PHIP	Q8WWQ0	1821 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	TRAPPC8	Q9Y2L5	1435 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	CASZ1	Q86V15	1759 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	MAPKBP1	O60336	1514 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	SMIM26	A0A096LP01	95 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	IZUMO1R	A6ND01	250 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	ARRDC5	A6NEK1	342 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	BBIP1	A8MTZ0	92 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	CLDN25	C9JDP6	229 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	ZNF670-ZNF695	F2Z2N8	137 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	LY6L	H3BQJ8	138 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	TNFSF13	O75888	250 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	IMPA1	P29218	277 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	CASP1	P29466	404 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	TGFBR1	P36897	503 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	ETV6	P41212	452 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	RPS10	P46783	165 aa	Known RBP	2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	ZNF138	P52744	262 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	S100A10	P60903	97 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	FKBP1A	P62942	108 aa	Known RBP	2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	HERVK_113	P63121	156 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	EBI3	Q14213	229 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	MSMO1	Q15800	293 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	RTL8B	Q17RB0	113 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	VMA21	Q3ZAQ7	101 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	NXNL2	Q5VZ03	156 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	LCN12	Q6JVE5	192 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	ZNF773	Q6PK81	442 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	TMEM14EP	Q6UXP3	125 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	ZNF664	Q8N3J9	261 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	TMEM75	Q8N9X5	138 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	FER1L6-AS1	Q8NA97	138 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	OR2M3	Q8NG83	312 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	OR10D4P	Q8NGN7	298 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	LMX1A	Q8TE12	382 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	TWIST2	Q8WVJ9	160 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	MS4A6E	Q96DS6	147 aa		2.7	□□□□□ -1.98
LGR5-204	ENST00000547310	BORCS8	Q96FH0	119 aa		2.7	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms