RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 A8MXK9 166 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 ZNF56Q15929 161 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 SRSF7Q16629 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
SSH1-203ENST00000546433 ARPC1AQ92747 370 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 A0A0G2JMM0 328 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 A0A1W2PPB8 328 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 A0A1W2PRS3 328 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 KIR3DP1A8MWS1 328 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 ICAM4Q14773 271 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 ZNF525Q8N782 197 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 MDS2Q8NDY4 140 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 OR4X2Q8NGF9 303 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 SLC25A28Q96A46 364 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 C21orf62Q9NYP8 219 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 TRBV20OR9-2A0A075B6H5 130 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 MSGN1A6NI15 193 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 FOXI3A8MTJ6 420 aaPredicted RBP8.72□□□□□ -1.01
SSH1-203ENST00000546433 J3QRE1 110 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 IGFBP2P18065 325 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 CDKN1AP38936 164 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 NUTF2P61970 127 aaKnown RBP8.72□□□□□ -1.01
SSH1-203ENST00000546433 MBNL2Q5VZF2 373 aaKnown RBP8.72□□□□□ -1.01
SSH1-203ENST00000546433 LINC00518Q8N0U6 118 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 CIARTQ8N365 385 aaPredicted RBP8.72□□□□□ -1.01
SSH1-203ENST00000546433 C7orf69Q9H7B7 122 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 CCDC88CQ9P219 2028 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 NPFFO15130 113 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 SIGLEC5O15389 551 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 ASIPP42127 132 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 HIST1H1AQ02539 215 aaPredicted RBP8.72□□□□□ -1.01
SSH1-203ENST00000546433 TMEM136Q6ZRR5 245 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 PPP1R27Q86WC6 154 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 FBXL7Q9UJT9 491 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 MTCL1Q9Y4B5 1905 aaKnown RBP8.72□□□□□ -1.01
SSH1-203ENST00000546433 RNF222A6NCQ9 220 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 EIF3GO75821 320 aaKnown RBP eCLIP8.72□□□□□ -1.01
SSH1-203ENST00000546433 FAM89BQ8N5H3 189 aa8.72□□□□□ -1.01
SSH1-203ENST00000546433 RIF1Q5UIP0 2472 aaKnown RBP8.71□□□□□ -1.01
SSH1-203ENST00000546433 LOC107984156A0A0G2JMH3 177 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.71□□□□□ -1.01
SSH1-203ENST00000546433 UQCRFS1P47985 274 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 TFF3Q07654 80 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 ARL17AQ8IVW1 177 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 FAM216BQ8N7L0 139 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 OR52E5Q8NH55 327 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 GVINP1Q7Z2Y8 2422 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 PLXNA4Q9HCM2 1894 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 PAX1P15863 534 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 FAM209BQ5JX69 171 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 ZIC4Q8N9L1 334 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 LINC01356Q8N9X3 169 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 FBXL15Q9H469 300 aa8.71□□□□□ -1.01
SSH1-203ENST00000546433 RPP21Q9H633 154 aaKnown RBP8.71□□□□□ -1.01
SSH1-203ENST00000546433 AKIRIN1Q9H9L7 192 aaPredicted RBP8.71□□□□□ -1.01
SSH1-203ENST00000546433 EP300Q09472 2414 aaPredicted RBP8.71□□□□□ -1.02
SSH1-203ENST00000546433 ATP5LO75964 103 aa8.71□□□□□ -1.02
SSH1-203ENST00000546433 CGAP01215 116 aa8.71□□□□□ -1.02
SSH1-203ENST00000546433 IGKV1D-33P01593 117 aa8.71□□□□□ -1.02
SSH1-203ENST00000546433 IGKV1-33P01594 117 aa8.71□□□□□ -1.02
SSH1-203ENST00000546433 SRSF6Q13247 344 aaKnown RBP8.71□□□□□ -1.02
SSH1-203ENST00000546433 ZNF497Q6ZNH5 498 aa8.71□□□□□ -1.02
SSH1-203ENST00000546433 TMEM144Q7Z5S9 345 aa8.71□□□□□ -1.02
SSH1-203ENST00000546433 MRPL20Q9BYC9 149 aaKnown RBP8.71□□□□□ -1.02
SSH1-203ENST00000546433 GEMIN7Q9H840 131 aaKnown RBP8.71□□□□□ -1.02
SSH1-203ENST00000546433 KIAA1671Q9BY89 1806 aa8.71□□□□□ -1.02
SSH1-203ENST00000546433 UPK2O00526 184 aa8.71□□□□□ -1.02
SSH1-203ENST00000546433 TUBA4BQ9H853 241 aa8.71□□□□□ -1.02
SSH1-203ENST00000546433 ZDBF2Q9HCK1 2354 aa8.71□□□□□ -1.02
SSH1-203ENST00000546433 IGHV3OR16-12A0A075B7B8 117 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 TRAV14DV4A0A0A6YYC5 116 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 FAM181BA6NEQ2 426 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 B4DSR2 109 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 PLP1P60201 277 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 SPOCK3Q9BQ16 436 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 RTN4RQ9BZR6 473 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 ASCC3Q8N3C0 2202 aaKnown RBP8.7□□□□□ -1.02
SSH1-203ENST00000546433 LTBP2Q14767 1821 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 A0A1B0GUT8 65 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 SGK494Q96LW2 274 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 ALKBH7Q9BT30 221 aaPredicted RBP8.7□□□□□ -1.02
SSH1-203ENST00000546433 OTORQ9NRC9 128 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 UNC13CQ8NB66 2214 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 CEACAM4O75871 244 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 KIAA1644Q3SXP7 199 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 PVRIGQ6DKI7 326 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 ZNF414Q96IQ9 312 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 PRELID3AQ96N28 172 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 SDF2L1Q9HCN8 221 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 C7orf71A4D174 169 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 C15orf61A6NNL5 157 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 H3BTX0 84 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 PLPPR1Q8TBJ4 325 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 ANK1P16157 1881 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 CKAP5Q14008 2032 aa8.7□□□□□ -1.02
SSH1-203ENST00000546433 IGKV3D-15A0A087WSY6 115 aa8.69□□□□□ -1.02
SSH1-203ENST00000546433 LY6G6EA0A0G2JKS1 128 aa8.69□□□□□ -1.02
SSH1-203ENST00000546433 A0A0G2JNJ9 132 aa8.69□□□□□ -1.02
SSH1-203ENST00000546433 IZUMO1RA6ND01 250 aa8.69□□□□□ -1.02
SSH1-203ENST00000546433 IGKV3-15P01624 115 aa8.69□□□□□ -1.02
SSH1-203ENST00000546433 CBLN1P23435 193 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms