RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 IGHV4OR15-8A0A075B7B6 117 aa13□□□□□ -0.33
LTBR-215ENST00000546296 A0A087WW49 117 aa13□□□□□ -0.33
LTBR-215ENST00000546296 FAM240BA0A1B0GVZ2 78 aa13□□□□□ -0.33
LTBR-215ENST00000546296 NDUFB8O95169 186 aa13□□□□□ -0.33
LTBR-215ENST00000546296 ERHP84090 104 aaKnown RBP13□□□□□ -0.33
LTBR-215ENST00000546296 EXOSC2Q13868 293 aaKnown RBP13□□□□□ -0.33
LTBR-215ENST00000546296 ANKRD55Q3KP44 614 aa13□□□□□ -0.33
LTBR-215ENST00000546296 C4orf46Q504U0 113 aa13□□□□□ -0.33
LTBR-215ENST00000546296 ZNF343Q6P1L6 599 aa13□□□□□ -0.33
LTBR-215ENST00000546296 FANCD2OSQ96PS1 177 aa13□□□□□ -0.33
LTBR-215ENST00000546296 RANGRFQ9HD47 186 aaPredicted RBP13□□□□□ -0.33
LTBR-215ENST00000546296 THYN1Q9P016 225 aa13□□□□□ -0.33
LTBR-215ENST00000546296 PEF1Q9UBV8 284 aaKnown RBP13□□□□□ -0.33
LTBR-215ENST00000546296 CMYA5Q8N3K9 4069 aa13□□□□□ -0.33
LTBR-215ENST00000546296 IGLV11-55A0A075B6I3 123 aa12.99□□□□□ -0.33
LTBR-215ENST00000546296 HLA-AP01891 365 aaKnown RBP12.99□□□□□ -0.33
LTBR-215ENST00000546296 TCRBP04435 133 aa12.99□□□□□ -0.33
LTBR-215ENST00000546296 OR4E1P0C645 316 aa12.99□□□□□ -0.33
LTBR-215ENST00000546296 SULT1A3P0DMM9 295 aa12.99□□□□□ -0.33
LTBR-215ENST00000546296 SULT1A4P0DMN0 295 aa12.99□□□□□ -0.33
LTBR-215ENST00000546296 IGLL1P15814 213 aa12.99□□□□□ -0.33
LTBR-215ENST00000546296 ANXA7P20073 488 aaKnown RBP12.99□□□□□ -0.33
LTBR-215ENST00000546296 ASAH1Q13510 395 aa12.99□□□□□ -0.33
LTBR-215ENST00000546296 FHL3Q13643 280 aa12.99□□□□□ -0.33
LTBR-215ENST00000546296 OR1L6Q8NGR2 347 aa12.99□□□□□ -0.33
LTBR-215ENST00000546296 RCC1LQ96I51 464 aaKnown RBP12.99□□□□□ -0.33
LTBR-215ENST00000546296 C20orf85Q9H1P6 137 aa12.99□□□□□ -0.33
LTBR-215ENST00000546296 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
LTBR-215ENST00000546296 TRAV6A0A075B6T7 132 aa12.98□□□□□ -0.33
LTBR-215ENST00000546296 DUXBA0A1W2PPF3 345 aa12.98□□□□□ -0.33
LTBR-215ENST00000546296 C9orf170A2RU37 121 aa12.98□□□□□ -0.33
LTBR-215ENST00000546296 SNCAP37840 140 aa12.98□□□□□ -0.33
LTBR-215ENST00000546296 HOXA1P49639 335 aaPredicted RBP12.98□□□□□ -0.33
LTBR-215ENST00000546296 SLURP1P55000 103 aa12.98□□□□□ -0.33
LTBR-215ENST00000546296 SPCS3P61009 180 aa12.98□□□□□ -0.33
LTBR-215ENST00000546296 OXLD1Q5BKU9 147 aa12.98□□□□□ -0.33
LTBR-215ENST00000546296 OR2C3Q8N628 320 aa12.98□□□□□ -0.33
LTBR-215ENST00000546296 EEF1AKMT3Q96AZ1 226 aa12.98□□□□□ -0.33
LTBR-215ENST00000546296 MCRIP2Q9BUT9 160 aaKnown RBP12.98□□□□□ -0.33
LTBR-215ENST00000546296 TBC1D24Q9ULP9 559 aa12.98□□□□□ -0.33
LTBR-215ENST00000546296 G3V4G9 280 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 DUS4LO95620 317 aaKnown RBP12.97□□□□□ -0.33
LTBR-215ENST00000546296 IGHV3-23P01764 117 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 ZP3P21754 424 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 SMCO1Q147U7 214 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 KLK9Q2XQG4 91 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 LYG2Q86SG7 212 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 C1QL4Q86Z23 238 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 LRTM2Q8N967 370 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 OR52E5Q8NH55 327 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 COQ8AQ8NI60 647 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 DCUN1D4Q92564 292 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 CXorf58Q96LI9 332 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 CACFD1Q9UGQ2 172 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 KLK9Q9UKQ9 250 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 S4R3C0 116 aa12.97□□□□□ -0.33
LTBR-215ENST00000546296 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.96□□□□□ -0.33
LTBR-215ENST00000546296 A0A1B0GU03 582 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 CEBPZOSA8MTT3 80 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 NXPH3O95157 252 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 HOXB5P09067 269 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 H2AFB2P0C5Z0 115 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 IFITM3Q01628 133 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 DHRS2Q13268 280 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 NMSQ5H8A3 153 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 FAM209BQ5JX69 171 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 OR1P1Q8NH06 330 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 OR1S1Q8NH92 325 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 ENKURQ8TC29 256 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 DLX4Q92988 240 aaPredicted RBP12.96□□□□□ -0.33
LTBR-215ENST00000546296 GPR61Q9BZJ8 451 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 NUDT15Q9NV35 164 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 DMRT1Q9Y5R6 373 aa12.96□□□□□ -0.33
LTBR-215ENST00000546296 TRBV7-1A0A0A6YYK4 115 aa12.95□□□□□ -0.34
LTBR-215ENST00000546296 OVOL1O14753 267 aa12.95□□□□□ -0.34
LTBR-215ENST00000546296 TRBV12-3P01733 135 aa12.95□□□□□ -0.34
LTBR-215ENST00000546296 HOXD3P31249 432 aaPredicted RBP12.95□□□□□ -0.34
LTBR-215ENST00000546296 SUB1P53999 127 aaKnown RBP eCLIP12.95□□□□□ -0.34
LTBR-215ENST00000546296 MFAP2P55001 183 aa12.95□□□□□ -0.34
LTBR-215ENST00000546296 DEFA1P59665 94 aa12.95□□□□□ -0.34
LTBR-215ENST00000546296 DEFA3P59666 94 aa12.95□□□□□ -0.34
LTBR-215ENST00000546296 AARDQ4LEZ3 155 aa12.95□□□□□ -0.34
LTBR-215ENST00000546296 MISP3Q96FF7 219 aa12.95□□□□□ -0.34
LTBR-215ENST00000546296 HEYLQ9NQ87 328 aaPredicted RBP12.95□□□□□ -0.34
LTBR-215ENST00000546296 TMED3Q9Y3Q3 217 aa12.95□□□□□ -0.34
LTBR-215ENST00000546296 IGHV3-21A0A0B4J1V1 117 aa12.94□□□□□ -0.34
LTBR-215ENST00000546296 MFSD2BA6NFX1 497 aa12.94□□□□□ -0.34
LTBR-215ENST00000546296 SEC14L6B5MCN3 397 aa12.94□□□□□ -0.34
LTBR-215ENST00000546296 TATDN3Q17R31 274 aa12.94□□□□□ -0.34
LTBR-215ENST00000546296 RPEL1Q2QD12 228 aa12.94□□□□□ -0.34
LTBR-215ENST00000546296 SAMD5Q5TGI4 173 aa12.94□□□□□ -0.34
LTBR-215ENST00000546296 CLEC19AQ6UXS0 136 aa12.94□□□□□ -0.34
LTBR-215ENST00000546296 VN1R17PQ8TDU5 208 aa12.94□□□□□ -0.34
LTBR-215ENST00000546296 PPP5D1E7EU14 171 aa12.93□□□□□ -0.34
LTBR-215ENST00000546296 INS-IGF2F8WCM5 200 aa12.93□□□□□ -0.34
LTBR-215ENST00000546296 IFNA21P01568 189 aa12.93□□□□□ -0.34
LTBR-215ENST00000546296 CLEC3BP05452 202 aa12.93□□□□□ -0.34
LTBR-215ENST00000546296 ARL3P36405 182 aa12.93□□□□□ -0.34
LTBR-215ENST00000546296 GGNBP1Q5YKI7 109 aa12.93□□□□□ -0.34
LTBR-215ENST00000546296 ZNF114Q8NC26 417 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms