RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 OR52E5Q8NH55 327 aa12.67□□□□□ -0.38
LIMS2-217ENST00000545738 GPN1Q9HCN4 374 aaPredicted RBP12.67□□□□□ -0.38
LIMS2-217ENST00000545738 PF4V1P10720 104 aa12.66□□□□□ -0.38
LIMS2-217ENST00000545738 RAB9AP51151 201 aa12.66□□□□□ -0.38
LIMS2-217ENST00000545738 BCAP31P51572 246 aa12.66□□□□□ -0.38
LIMS2-217ENST00000545738 SPCS3P61009 180 aa12.66□□□□□ -0.38
LIMS2-217ENST00000545738 IAH1Q2TAA2 248 aaPredicted RBP12.66□□□□□ -0.38
LIMS2-217ENST00000545738 OR2C3Q8N628 320 aa12.66□□□□□ -0.38
LIMS2-217ENST00000545738 OR5M8Q8NGP6 311 aa12.66□□□□□ -0.38
LIMS2-217ENST00000545738 OR1S1Q8NH92 325 aa12.66□□□□□ -0.38
LIMS2-217ENST00000545738 TMEM170AQ8WVE7 144 aa12.66□□□□□ -0.38
LIMS2-217ENST00000545738 GON7Q9BXV9 100 aa12.66□□□□□ -0.38
LIMS2-217ENST00000545738 MAGT1Q9H0U3 335 aa12.66□□□□□ -0.38
LIMS2-217ENST00000545738 ELANEP08246 267 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 H2BFSP57053 126 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 C3orf56Q8N813 242 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 OR4X2Q8NGF9 303 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 TMEM68Q96MH6 324 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 P2RX4Q99571 388 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 RBKSQ9H477 322 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 PLEKHA3Q9HB20 300 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 TRBV9A0A0B4J1U6 114 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 C13orf42A0A1B0GVH6 325 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 A0A1W2PRX2 142 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 FAM25EA8MYX2 175 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 GOSR2O14653 212 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 IL15RAQ13261 267 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 SRSF8Q9BRL6 282 aaKnown RBP12.65□□□□□ -0.38
LIMS2-217ENST00000545738 GNB4Q9HAV0 340 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 ZNF355PQ9NSJ1 428 aa12.65□□□□□ -0.38
LIMS2-217ENST00000545738 IGLV11-55A0A075B6I3 123 aa12.64□□□□□ -0.39
LIMS2-217ENST00000545738 INS-IGF2F8WCM5 200 aa12.64□□□□□ -0.39
LIMS2-217ENST00000545738 IFNA21P01568 189 aa12.64□□□□□ -0.39
LIMS2-217ENST00000545738 CXCL3P19876 107 aa12.64□□□□□ -0.39
LIMS2-217ENST00000545738 HOXA1P49639 335 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-217ENST00000545738 ID3Q02535 119 aa12.64□□□□□ -0.39
LIMS2-217ENST00000545738 KLK9Q2XQG4 91 aa12.64□□□□□ -0.39
LIMS2-217ENST00000545738 BSXQ3C1V8 233 aa12.64□□□□□ -0.39
LIMS2-217ENST00000545738 PDCD10Q9BUL8 212 aa12.64□□□□□ -0.39
LIMS2-217ENST00000545738 KLK9Q9UKQ9 250 aa12.64□□□□□ -0.39
LIMS2-217ENST00000545738 F11RQ9Y624 299 aaKnown RBP12.64□□□□□ -0.39
LIMS2-217ENST00000545738 PIGBOS1A0A0B4J2F0 54 aa12.63□□□□□ -0.39
LIMS2-217ENST00000545738 OR2J3O76001 311 aa12.63□□□□□ -0.39
LIMS2-217ENST00000545738 TMEM50AO95807 157 aa12.63□□□□□ -0.39
LIMS2-217ENST00000545738 TRGV3P03979 118 aa12.63□□□□□ -0.39
LIMS2-217ENST00000545738 TPPP2P59282 170 aa12.63□□□□□ -0.39
LIMS2-217ENST00000545738 POLR2GP62487 172 aaKnown RBP eCLIP12.63□□□□□ -0.39
LIMS2-217ENST00000545738 ZNF491Q8N8L2 437 aa12.63□□□□□ -0.39
LIMS2-217ENST00000545738 OR11H7Q8NGC8 314 aa12.63□□□□□ -0.39
LIMS2-217ENST00000545738 GSKIPQ9P0R6 139 aa12.63□□□□□ -0.39
LIMS2-217ENST00000545738 RCL1Q9Y2P8 373 aaKnown RBP12.63□□□□□ -0.39
LIMS2-217ENST00000545738 S4R3C0 116 aa12.63□□□□□ -0.39
LIMS2-217ENST00000545738 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 C5orf51A6NDU8 294 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 CEBPZOSA8MTT3 80 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 SSNA1O43805 119 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 NDUFB8O95169 186 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 BRI3O95415 125 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 IGHV3-11P01762 117 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 MBPP02686 304 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-217ENST00000545738 RNASE2P10153 161 aaKnown RBP12.62□□□□□ -0.39
LIMS2-217ENST00000545738 IAPPP10997 89 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 RPL23AP62750 156 aaKnown RBP12.62□□□□□ -0.39
LIMS2-217ENST00000545738 RHOGP84095 191 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 KHDC1LQ5JSQ8 128 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 COMMD1Q8N668 190 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 ZNF114Q8NC26 417 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 DTD1Q8TEA8 209 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 H3BUA1 57 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 FCN2Q15485 313 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 DEFB136Q30KP8 78 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 NSUN5P1Q3KNT7 163 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 SLC7A5P1Q8MH63 180 aa12.62□□□□□ -0.39
LIMS2-217ENST00000545738 IGHV3-21A0A0B4J1V1 117 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 MFSD2BA6NFX1 497 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 FAM90A26D6RGX4 464 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 SCGB1D2O95969 90 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 NKX2-1P43699 371 aaPredicted RBP12.61□□□□□ -0.39
LIMS2-217ENST00000545738 PVRIGQ6DKI7 326 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 TMEM65Q6PI78 240 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 C8orf86Q6ZUL3 223 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 HSD17B13Q7Z5P4 300 aaPredicted RBP12.61□□□□□ -0.39
LIMS2-217ENST00000545738 SPATA3Q8NHX4 192 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 C2orf50Q96LR7 162 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 DUX3Q96PT4 197 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 SLA2Q9H6Q3 261 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 MGAT4CQ9UBM8 478 aa12.61□□□□□ -0.39
LIMS2-217ENST00000545738 TSSC4Q9Y5U2 329 aaPredicted RBP12.61□□□□□ -0.39
LIMS2-217ENST00000545738 SYNGR2O43760 224 aa12.6□□□□□ -0.39
LIMS2-217ENST00000545738 TRBV12-3P01733 135 aa12.6□□□□□ -0.39
LIMS2-217ENST00000545738 IGHV3-23P01764 117 aa12.6□□□□□ -0.39
LIMS2-217ENST00000545738 DEFA4P12838 97 aa12.6□□□□□ -0.39
LIMS2-217ENST00000545738 CDX1P47902 265 aaPredicted RBP12.6□□□□□ -0.39
LIMS2-217ENST00000545738 PAX9P55771 341 aa12.6□□□□□ -0.39
LIMS2-217ENST00000545738 C15orf32Q32M92 178 aa12.6□□□□□ -0.39
LIMS2-217ENST00000545738 GSG1LQ6UXU4 331 aa12.6□□□□□ -0.39
LIMS2-217ENST00000545738 OR1P1Q8NH06 330 aa12.6□□□□□ -0.39
LIMS2-217ENST00000545738 HEYLQ9NQ87 328 aaPredicted RBP12.6□□□□□ -0.39
LIMS2-217ENST00000545738 I3L521 148 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms