RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 WFDC11Q8NEX6 87 aa9.04□□□□□ -0.96
TNC-213ENST00000544972 OR2G3Q8NGZ4 309 aa9.04□□□□□ -0.96
TNC-213ENST00000544972 PIFOQ8TCI5 191 aa9.04□□□□□ -0.96
TNC-213ENST00000544972 SCGB1C1Q8TD33 95 aa9.04□□□□□ -0.96
TNC-213ENST00000544972 SRSF12Q8WXF0 261 aaKnown RBP9.04□□□□□ -0.96
TNC-213ENST00000544972 TAF15Q92804 592 aaKnown RBP eCLIP9.04□□□□□ -0.96
TNC-213ENST00000544972 GGACTQ9BVM4 153 aa9.04□□□□□ -0.96
TNC-213ENST00000544972 MEGF9Q9H1U4 602 aa9.04□□□□□ -0.96
TNC-213ENST00000544972 MED9Q9NWA0 146 aa9.04□□□□□ -0.96
TNC-213ENST00000544972 KIAA1456Q9P272 454 aa9.04□□□□□ -0.96
TNC-213ENST00000544972 ZANQ9Y493 2812 aa9.04□□□□□ -0.96
TNC-213ENST00000544972 FASNP49327 2511 aaKnown RBP9.03□□□□□ -0.96
TNC-213ENST00000544972 ZNF705EA8MWA4 302 aaPredicted RBP9.03□□□□□ -0.96
TNC-213ENST00000544972 TEX46H3BTG2 121 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 J3QLI3 93 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 AREGP15514 252 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 SNCAP37840 140 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 FHITP49789 147 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 DLK1P80370 383 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 ARSJQ5FYB0 599 aaPredicted RBP9.03□□□□□ -0.96
TNC-213ENST00000544972 SLC25A24Q6NUK1 477 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 TMEM182Q6ZP80 229 aaPredicted RBP9.03□□□□□ -0.96
TNC-213ENST00000544972 CENPVQ7Z7K6 275 aaPredicted RBP9.03□□□□□ -0.96
TNC-213ENST00000544972 P2RX4Q99571 388 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 UNC79Q9P2D8 2635 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 NCBP2LA6PVI3 153 aaKnown RBP9.03□□□□□ -0.96
TNC-213ENST00000544972 REG1AP05451 166 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 PVRIGQ6DKI7 326 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 TREML4Q6UXN2 200 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 COMMD7Q86VX2 200 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 Q8N9W7 124 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 SAT2Q96F10 170 aaPredicted RBP9.03□□□□□ -0.96
TNC-213ENST00000544972 PSMG3Q9BT73 122 aaPredicted RBP9.03□□□□□ -0.96
TNC-213ENST00000544972 WDR83OSQ9Y284 106 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 ITPR2Q14571 2701 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 ABCA1O95477 2261 aa9.03□□□□□ -0.96
TNC-213ENST00000544972 APELAP0DMC3 54 aa9.02□□□□□ -0.97
TNC-213ENST00000544972 FGF7P21781 194 aa9.02□□□□□ -0.97
TNC-213ENST00000544972 MFAP2P55001 183 aa9.02□□□□□ -0.97
TNC-213ENST00000544972 MLANAQ16655 118 aa9.02□□□□□ -0.97
TNC-213ENST00000544972 PXDC1Q5TGL8 231 aa9.02□□□□□ -0.97
TNC-213ENST00000544972 CIARTQ8N365 385 aaPredicted RBP9.02□□□□□ -0.97
TNC-213ENST00000544972 ZNF114Q8NC26 417 aa9.02□□□□□ -0.97
TNC-213ENST00000544972 NPCDR1Q9BY65 106 aa9.02□□□□□ -0.97
TNC-213ENST00000544972 FBXO7Q9Y3I1 522 aa9.02□□□□□ -0.97
TNC-213ENST00000544972 LSM4Q9Y4Z0 139 aaKnown RBP9.02□□□□□ -0.97
TNC-213ENST00000544972 CSPG4Q6UVK1 2322 aa9.02□□□□□ -0.97
TNC-213ENST00000544972 MFSD2BA6NFX1 497 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 UMAD1C9J7I0 102 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 CNIH1O95406 144 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 RAB5CP51148 216 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 CX3CL1P78423 397 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 FXYD3Q14802 87 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 BTNL8Q6UX41 500 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 ZNF562Q6V9R5 426 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 Q6ZRG5 221 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 C19orf35Q6ZS72 473 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 LYPD6BQ8NI32 183 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 SSMEM1Q8WWF3 244 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 CITED4Q96RK1 184 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 VSIRQ9H7M9 311 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 PARP11Q9NR21 331 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 TIMM9Q9Y5J7 89 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 CREBBPQ92793 2442 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 FNDC10F2Z333 226 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 TRIM77I1YAP6 450 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 SUB1P53999 127 aaKnown RBP eCLIP9.01□□□□□ -0.97
TNC-213ENST00000544972 BLOC1S1P78537 153 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 SERF2P84101 59 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 NDPQ00604 133 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 CD69Q07108 199 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 FOXC2Q99958 501 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 SRSF8Q9BRL6 282 aaKnown RBP9.01□□□□□ -0.97
TNC-213ENST00000544972 FAM103A1Q9BTL3 118 aaKnown RBP9.01□□□□□ -0.97
TNC-213ENST00000544972 FNDC4Q9H6D8 234 aaPredicted RBP9.01□□□□□ -0.97
TNC-213ENST00000544972 NPVFQ9HCQ7 196 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 C1RLQ9NZP8 487 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 DMRT1Q9Y5R6 373 aa9.01□□□□□ -0.97
TNC-213ENST00000544972 ZFHX3Q15911 3703 aa9□□□□□ -0.97
TNC-213ENST00000544972 ITPR3Q14573 2671 aa9□□□□□ -0.97
TNC-213ENST00000544972 IGHV7-81A0A0B4J1V7 117 aa9□□□□□ -0.97
TNC-213ENST00000544972 SMCO3A2RU48 225 aa9□□□□□ -0.97
TNC-213ENST00000544972 FSHBP01225 129 aa9□□□□□ -0.97
TNC-213ENST00000544972 PRH1P02810 166 aa9□□□□□ -0.97
TNC-213ENST00000544972 CAMLGP49069 296 aa9□□□□□ -0.97
TNC-213ENST00000544972 GAMTQ14353 236 aa9□□□□□ -0.97
TNC-213ENST00000544972 HSD17B13Q7Z5P4 300 aaPredicted RBP9□□□□□ -0.97
TNC-213ENST00000544972 MRPL41Q8IXM3 137 aaKnown RBP9□□□□□ -0.97
TNC-213ENST00000544972 RNASEH2CQ8TDP1 164 aaKnown RBP9□□□□□ -0.97
TNC-213ENST00000544972 MGST2Q99735 147 aa9□□□□□ -0.97
TNC-213ENST00000544972 SSX3Q99909 188 aa9□□□□□ -0.97
TNC-213ENST00000544972 HRH4Q9H3N8 390 aa9□□□□□ -0.97
TNC-213ENST00000544972 RPRMQ9NS64 109 aa9□□□□□ -0.97
TNC-213ENST00000544972 PFDN2Q9UHV9 154 aa9□□□□□ -0.97
TNC-213ENST00000544972 FAM96BQ9Y3D0 163 aa9□□□□□ -0.97
TNC-213ENST00000544972 CCDC168Q8NDH2 2452 aa9□□□□□ -0.97
TNC-213ENST00000544972 ZNF469Q96JG9 3925 aaPredicted RBP8.99□□□□□ -0.97
TNC-213ENST00000544972 IGKV1OR2-108A0A075B7D4 117 aa8.99□□□□□ -0.97
TNC-213ENST00000544972 MPDU1O75352 247 aa8.99□□□□□ -0.97
TNC-213ENST00000544972 HLA-DRB1P01911 266 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms