RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 GABARAPO95166 117 aa15.2■□□□□ 0.02
DDB1-220ENST00000542337 RBMY1DP0C7P1 496 aaKnown RBP15.2■□□□□ 0.02
DDB1-220ENST00000542337 Q56UQ5 140 aa15.2■□□□□ 0.02
DDB1-220ENST00000542337 RNASE12Q5GAN4 147 aaKnown RBP15.2■□□□□ 0.02
DDB1-220ENST00000542337 GPR107Q5VW38 600 aa15.2■□□□□ 0.02
DDB1-220ENST00000542337 UBAC2Q8NBM4 344 aa15.2■□□□□ 0.02
DDB1-220ENST00000542337 OR1P1Q8NH06 330 aa15.2■□□□□ 0.02
DDB1-220ENST00000542337 IL17DQ8TAD2 202 aa15.2■□□□□ 0.02
DDB1-220ENST00000542337 SCARB1Q8WTV0 552 aa15.2■□□□□ 0.02
DDB1-220ENST00000542337 ZNF486Q96H40 463 aaPredicted RBP15.2■□□□□ 0.02
DDB1-220ENST00000542337 EXTL2Q9UBQ6 330 aa15.2■□□□□ 0.02
DDB1-220ENST00000542337 IGHV3-21A0A0B4J1V1 117 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 NDUFA4O00483 81 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 ATG12O94817 140 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 TBPP20226 339 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 CTF1Q16619 201 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 LAMTOR1Q6IAA8 161 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 TMEM190Q8WZ59 177 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 SEC22AQ96IW7 307 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 C20orf24Q9BUV8 137 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 WFDC10AQ9H1F0 79 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 C5orf66Q9H5L9 145 aa15.19■□□□□ 0.02
DDB1-220ENST00000542337 DAZ1Q9NQZ3 744 aaKnown RBP15.19■□□□□ 0.02
DDB1-220ENST00000542337 MFAP2P55001 183 aa15.18■□□□□ 0.02
DDB1-220ENST00000542337 ERHP84090 104 aaKnown RBP15.18■□□□□ 0.02
DDB1-220ENST00000542337 ARRDC1Q8N5I2 433 aa15.18■□□□□ 0.02
DDB1-220ENST00000542337 MRGPRFQ96AM1 343 aa15.18■□□□□ 0.02
DDB1-220ENST00000542337 NAA50Q9GZZ1 169 aaKnown RBP15.18■□□□□ 0.02
DDB1-220ENST00000542337 KLK11Q9UBX7 282 aa15.18■□□□□ 0.02
DDB1-220ENST00000542337 RYR3Q15413 4870 aa15.18■□□□□ 0.02
DDB1-220ENST00000542337 NUPL2O15504 423 aaKnown RBP15.17■□□□□ 0.02
DDB1-220ENST00000542337 RND3P61587 244 aa15.17■□□□□ 0.02
DDB1-220ENST00000542337 HSPE1P61604 102 aaKnown RBP15.17■□□□□ 0.02
DDB1-220ENST00000542337 RELQ04864 619 aaPredicted RBP15.17■□□□□ 0.02
DDB1-220ENST00000542337 GPR141Q7Z602 305 aa15.17■□□□□ 0.02
DDB1-220ENST00000542337 OR2C3Q8N628 320 aa15.17■□□□□ 0.02
DDB1-220ENST00000542337 OR52I2Q8NH67 350 aa15.17■□□□□ 0.02
DDB1-220ENST00000542337 MISP3Q96FF7 219 aa15.17■□□□□ 0.02
DDB1-220ENST00000542337 SPAG8Q99932 426 aaPredicted RBP15.17■□□□□ 0.02
DDB1-220ENST00000542337 RETNQ9HD89 108 aa15.17■□□□□ 0.02
DDB1-220ENST00000542337 MTFP1Q9UDX5 166 aa15.17■□□□□ 0.02
DDB1-220ENST00000542337 LOC102724200A0A096LPH7 203 aaPredicted RBP15.16■□□□□ 0.02
DDB1-220ENST00000542337 DBX1A6NMT0 343 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 K7EIM0 57 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 K7EMT4 169 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 CD3DP04234 171 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 SMIM18P0DKX4 95 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 MFAP4P55083 255 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 PIGPP57054 158 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 PRCDQ00LT1 54 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 ZFAND1Q8TCF1 268 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 FAM110AQ9BQ89 295 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 CHRDL1Q9BU40 450 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 GGTLC1Q9BX51 225 aa15.16■□□□□ 0.02
DDB1-220ENST00000542337 MRPS26Q9BYN8 205 aaKnown RBP15.16■□□□□ 0.02
DDB1-220ENST00000542337 RGS5O15539 181 aa15.15■□□□□ 0.02
DDB1-220ENST00000542337 CCDC71LQ8N9Z2 235 aa15.15■□□□□ 0.02
DDB1-220ENST00000542337 TXN2Q99757 166 aa15.15■□□□□ 0.02
DDB1-220ENST00000542337 COPZ2Q9P299 210 aa15.15■□□□□ 0.02
DDB1-220ENST00000542337 C15orf62A8K5M9 175 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 IGKV1-39P01597 117 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 IGKV1D-39P04432 117 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 PI3P19957 117 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 AKR1C2P52895 323 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 TAS2R19P59542 299 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 LHFPL1Q86WI0 220 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 TMEM229BQ8NBD8 167 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 TERB2Q8NHR7 220 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 ABHD1Q96SE0 405 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 PDCD10Q9BUL8 212 aa15.14■□□□□ 0.01
DDB1-220ENST00000542337 C3orf85A0A1B0GTC6 90 aa15.13■□□□□ 0.01
DDB1-220ENST00000542337 TSPAN4O14817 238 aa15.13■□□□□ 0.01
DDB1-220ENST00000542337 YIF1AO95070 293 aa15.13■□□□□ 0.01
DDB1-220ENST00000542337 RAB3DO95716 219 aa15.13■□□□□ 0.01
DDB1-220ENST00000542337 SNCAP37840 140 aa15.13■□□□□ 0.01
DDB1-220ENST00000542337 MRPS10P82664 201 aaKnown RBP15.13■□□□□ 0.01
DDB1-220ENST00000542337 TRIM16LQ309B1 348 aa15.13■□□□□ 0.01
DDB1-220ENST00000542337 SCGB2B2Q4G0G5 96 aa15.13■□□□□ 0.01
DDB1-220ENST00000542337 ZNF114Q8NC26 417 aa15.13■□□□□ 0.01
DDB1-220ENST00000542337 F8W735 103 aaPredicted RBP15.12■□□□□ 0.01
DDB1-220ENST00000542337 GABARAPH6UMI1 98 aa15.12■□□□□ 0.01
DDB1-220ENST00000542337 I3L2K1 104 aa15.12■□□□□ 0.01
DDB1-220ENST00000542337 B3GALNT1O75752 331 aa15.12■□□□□ 0.01
DDB1-220ENST00000542337 MT-CO2P00403 227 aa15.12■□□□□ 0.01
DDB1-220ENST00000542337 IFNA17P01571 189 aa15.12■□□□□ 0.01
DDB1-220ENST00000542337 CTSGP08311 255 aa15.12■□□□□ 0.01
DDB1-220ENST00000542337 FCGR2BP31994 310 aaPredicted RBP15.12■□□□□ 0.01
DDB1-220ENST00000542337 ADMP35318 185 aa15.12■□□□□ 0.01
DDB1-220ENST00000542337 PPP5CP53041 499 aa15.12■□□□□ 0.01
DDB1-220ENST00000542337 SSBP1Q04837 148 aaKnown RBP15.12■□□□□ 0.01
DDB1-220ENST00000542337 SLC35G3Q8N808 338 aa15.12■□□□□ 0.01
DDB1-220ENST00000542337 RNASE11Q8TAA1 199 aaKnown RBP15.12■□□□□ 0.01
DDB1-220ENST00000542337 PINX1Q96BK5 328 aaKnown RBP15.12■□□□□ 0.01
DDB1-220ENST00000542337 RRNAD1Q96FB5 475 aaKnown RBP15.12■□□□□ 0.01
DDB1-220ENST00000542337 IGHV3OR16-8A0A075B7F1 116 aa15.11■□□□□ 0.01
DDB1-220ENST00000542337 OR4C46A6NHA9 309 aa15.11■□□□□ 0.01
DDB1-220ENST00000542337 ZNF207O43670 478 aaKnown RBP15.11■□□□□ 0.01
DDB1-220ENST00000542337 GNG7O60262 68 aa15.11■□□□□ 0.01
DDB1-220ENST00000542337 SUB1P53999 127 aaKnown RBP eCLIP15.11■□□□□ 0.011e-6■■■■■ 30.7
DDB1-220ENST00000542337 MEF2DQ14814 521 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms