RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TEX22C9J3V5 150 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 UMAD1C9J7I0 102 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 LY86O95711 162 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 TSPAN15O95858 294 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 SAA4P35542 130 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 CEACAM3P40198 252 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 UBE2E1P51965 193 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 RAB11AP62491 216 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 RPP30P78346 268 aaKnown RBP9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 C2orf83Q53S99 150 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 RCC1LQ96I51 464 aaKnown RBP9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 TIMM9Q9Y5J7 89 aa9.79□□□□□ -0.84
AP003559.1-201ENST00000540906 ANKRD17O75179 2603 aaKnown RBP9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 INS-IGF2F8WCM5 200 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 OR13C7P0DN81 318 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 COMPP49747 757 aaPredicted RBP9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 FGF8P55075 233 aaPredicted RBP9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 MMDQ15546 238 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 CLEC12BQ2HXU8 276 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 MINOS1Q5TGZ0 78 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 PPP1R27Q86WC6 154 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 MMD2Q8IY49 270 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 RPP25LQ8N5L8 163 aaKnown RBP9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 Q8N6K4 173 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 MAPK1IP1LQ8NDC0 245 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 P2RX4Q99571 388 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 MRPL36Q9P0J6 103 aaKnown RBP9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 LSM4Q9Y4Z0 139 aaKnown RBP9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 MINOS1-NBL1R4GNA1 71 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 ABCA12Q86UK0 2595 aa9.78□□□□□ -0.84
AP003559.1-201ENST00000540906 IGKV1OR2-108A0A075B7D4 117 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 HMGB3O15347 200 aaKnown RBP9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 YIF1AO95070 293 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 MOSP00540 346 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 IGHV3-48P01763 117 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 CD5P06127 495 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 H2AFB1P0C5Y9 115 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 RPL27AP46776 148 aaKnown RBP9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 HES1Q14469 280 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 TMEM41BQ5BJD5 291 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 FFAR4Q5NUL3 377 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 MIC13Q5XKP0 118 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 NARS2Q96I59 477 aaKnown RBP9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 RARRES2Q99969 163 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 GGTLC1Q9BX51 225 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 FNDC4Q9H6D8 234 aaPredicted RBP9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 TREM1Q9NP99 234 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 DMRT1Q9Y5R6 373 aa9.77□□□□□ -0.84
AP003559.1-201ENST00000540906 MAP1AP78559 2803 aaPredicted RBP9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 TMEM218A2RU14 115 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 NPFFO15130 113 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 NBR2O15453 112 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 NDUFA3O95167 84 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 SERF2P84101 59 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 ATRAIDQ6UW56 229 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 UQCC3Q6UW78 93 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 LCN15Q6UWW0 184 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 NPBQ8NG41 125 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 OR2T6Q8NHC8 308 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 SFT2D1Q8WV19 159 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 SSMEM1Q8WWF3 244 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 GGACTQ9BVM4 153 aa9.77□□□□□ -0.85
AP003559.1-201ENST00000540906 A0A1W2PN81 502 aa9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 NUDT19A8MXV4 375 aa9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 AVPP01185 164 aa9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 IGHV4-38-2P0DP08 117 aa9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 CHRNA7P36544 502 aa9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 ERHP84090 104 aaKnown RBP9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 BRD3OSQ6XYD6 125 aa9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 SRSF12Q8WXF0 261 aaKnown RBP9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 RNF5Q99942 180 aa9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 SLC25A22Q9H936 323 aa9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 TBL2Q9Y4P3 447 aaKnown RBP9.76□□□□□ -0.85
AP003559.1-201ENST00000540906 TRAV40A0A0B4J280 105 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 KRBOX1C9JBD0 128 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 NDPQ00604 133 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 CD69Q07108 199 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 EBI3Q14213 229 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 GAMTQ14353 236 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 PLGLAQ15195 96 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 GUK1Q16774 197 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 DPPA3Q6W0C5 159 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 MBD3L1Q8WWY6 194 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 FAM103A1Q9BTL3 118 aaKnown RBP9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 IGHV3-21A0A0B4J1V1 117 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 OOSP1A8MZH6 123 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 MSMBP08118 114 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 GATA2P23769 480 aaPredicted RBP9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 GUCA2BQ16661 112 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 C5orf64Q2M2E5 130 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 CCDC144NLQ6NUI1 221 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 FAM122CQ6P4D5 195 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 SLC16A13Q7RTY0 426 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 OR2T10Q8NGZ9 312 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 TMPRSS5Q9H3S3 457 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 NPVFQ9HCQ7 196 aa9.75□□□□□ -0.85
AP003559.1-201ENST00000540906 ABCA1O95477 2261 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 CELSR1Q9NYQ6 3014 aa9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 SCAF4O95104 1147 aaKnown RBP9.74□□□□□ -0.85
AP003559.1-201ENST00000540906 LINC00869P0C866 280 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms