RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 NOVP48745 357 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 TSPEAR-AS2P59090 65 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 RTL8BQ17RB0 113 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 AADACL3Q5VUY0 350 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 HRCT1Q6UXD1 115 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 PRR15Q8IV56 129 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 C11orf42Q8N5U0 333 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 MIR7-3HGQ8N6C7 128 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 NDFIP1Q9BT67 221 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 AICDAQ9GZX7 198 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 TNFRSF19Q9NS68 423 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 IL36BQ9NZH7 164 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 CKLFQ9UBR5 152 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 FUT9Q9Y231 359 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 HIGD1AQ9Y241 93 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 DOCK4Q8N1I0 1966 aa3.56□□□□□ -1.84
PRKDC-209ENST00000540819 OVOS2A0A0G2JMS6 1433 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 OVOS2A0A0J9YW53 1432 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 OVOS2Q6IE36 1432 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 SMG6Q86US8 1419 aaKnown RBP3.55□□□□□ -1.84
PRKDC-209ENST00000540819 AGRNO00468 2067 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 ZNF638Q14966 1978 aaKnown RBP3.55□□□□□ -1.84
PRKDC-209ENST00000540819 MYH7BA7E2Y1 1941 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 TRBV6-6A0A0A6YYG2 114 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 TRAV5A0A0B4J249 113 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 PINLYPA6NC86 204 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 TLCD2A6NGC4 264 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 A8MWP4 228 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 ATP6V1G2-DDX39BF2Z307 99 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 H7BYZ3 331 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 OR2H2O95918 312 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 ZNF80P51504 273 aaPredicted RBP3.55□□□□□ -1.84
PRKDC-209ENST00000540819 TAS2R20P59543 309 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 PLCXD2Q0VAA5 305 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 EIF3IQ13347 325 aaKnown RBP3.55□□□□□ -1.84
PRKDC-209ENST00000540819 C10orf91Q5T1B1 145 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 LHFPL1Q86WI0 220 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 C10orf126Q8N4M7 172 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 SPANXA2-OT1Q8N9U9 137 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 OR4C16Q8NGL9 310 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 FNDC9Q8TBE3 224 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 HIST1H2BAQ96A08 127 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 SLAMF6Q96DU3 332 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 BORCS8Q96FH0 119 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 TEX37Q96LM6 180 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 CARD19Q96LW7 228 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 SLC25A21Q9BQT8 299 aaPredicted RBP3.55□□□□□ -1.84
PRKDC-209ENST00000540819 DERL1Q9BUN8 251 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 C11orf1Q9H5F2 150 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 CACYBPQ9HB71 228 aaKnown RBP3.55□□□□□ -1.84
PRKDC-209ENST00000540819 XAGE1AQ9HD64 81 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 SNX12Q9UMY4 172 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 CABIN1Q9Y6J0 2220 aa3.55□□□□□ -1.84
PRKDC-209ENST00000540819 SCN1AP35498 2009 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 CAMSAP2Q08AD1 1489 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 MAST2Q6P0Q8 1798 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 IGLV3-10A0A075B6K4 115 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 TRBV24-1A0A075B6N3 115 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 A0A096LNJ9 63 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 ARRDC5A6NEK1 342 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 TAX1BP3O14907 124 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 SH2D1AO60880 128 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 CDS2O95674 445 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 LHBP01229 141 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 IGKV1D-33P01593 117 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 IGKV1-33P01594 117 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 TRGC2P03986 189 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 NFYBP25208 207 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 MPV17P39210 176 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 RPL27AP46776 148 aaKnown RBP3.54□□□□□ -1.84
PRKDC-209ENST00000540819 TAS2R30P59541 319 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 C14orf177Q52M58 125 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 TCTE3Q8IZS6 198 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 PACRGLQ8N7B6 248 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 SLC30A7Q8NEW0 376 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 OR5C1Q8NGR4 320 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 RPS4Y2Q8TD47 263 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 RBMXL1Q96E39 390 aaKnown RBP3.54□□□□□ -1.84
PRKDC-209ENST00000540819 GGACTQ9BVM4 153 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 YIPF3Q9GZM5 350 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 RBM7Q9Y580 266 aaKnown RBP3.54□□□□□ -1.84
PRKDC-209ENST00000540819 TRAPPC1Q9Y5R8 145 aa3.54□□□□□ -1.84
PRKDC-209ENST00000540819 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.53□□□□□ -1.84
PRKDC-209ENST00000540819 IGKV3D-15A0A087WSY6 115 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 A6NED7 52 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 FAM25AB3EWG3 89 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 FAM25CB3EWG5 89 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 FAM25GB3EWG6 89 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 SLC25A20O43772 301 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 IFNGP01579 166 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 TRGV3P03979 118 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 UCHL1P09936 223 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 ZNF883P0CG24 379 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 P0DMU3 169 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 FAM231AP0DMU4 169 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 FAM231CP0DMU5 169 aa3.53□□□□□ -1.84
PRKDC-209ENST00000540819 S100A4P26447 101 aaKnown RBP3.53□□□□□ -1.84
PRKDC-209ENST00000540819 FKBP2P26885 142 aaKnown RBP3.53□□□□□ -1.84
PRKDC-209ENST00000540819 WNT4P56705 351 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms