RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 UXS1Q8NBZ7 420 aa12.97□□□□□ -0.33
UBC-208ENST00000540700 MS4A10Q96PG2 267 aa12.97□□□□□ -0.33
UBC-208ENST00000540700 FANCD2OSQ96PS1 177 aa12.97□□□□□ -0.33
UBC-208ENST00000540700 DHFRP00374 187 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 ELANEP08246 267 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 OR13C7P0DN81 318 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 PF4V1P10720 104 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 SLC25A6P12236 298 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 OR4D5Q8NGN0 318 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 OR5M8Q8NGP6 311 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 OR52E5Q8NH55 327 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 TMEM68Q96MH6 324 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 GON7Q9BXV9 100 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 HSPB7Q9UBY9 170 aa12.96□□□□□ -0.33
UBC-208ENST00000540700 IFNA17P01571 189 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 RAB9AP51151 201 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 SPCS3P61009 180 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 TNFRSF9Q07011 255 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 KLK9Q2XQG4 91 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 OR2C3Q8N628 320 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 COMMD1Q8N668 190 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 OR4X2Q8NGF9 303 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 WDR89Q96FK6 387 aaPredicted RBP12.95□□□□□ -0.34
UBC-208ENST00000540700 SRSF8Q9BRL6 282 aaKnown RBP12.95□□□□□ -0.34
UBC-208ENST00000540700 RBKSQ9H477 322 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 GNB4Q9HAV0 340 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 GPN1Q9HCN4 374 aaPredicted RBP12.95□□□□□ -0.34
UBC-208ENST00000540700 KLK9Q9UKQ9 250 aa12.95□□□□□ -0.34
UBC-208ENST00000540700 TRBV9A0A0B4J1U6 114 aa12.94□□□□□ -0.34
UBC-208ENST00000540700 INS-IGF2F8WCM5 200 aa12.94□□□□□ -0.34
UBC-208ENST00000540700 SIX6O95475 246 aa12.94□□□□□ -0.34
UBC-208ENST00000540700 THOC7Q6I9Y2 204 aaKnown RBP12.94□□□□□ -0.34
UBC-208ENST00000540700 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
UBC-208ENST00000540700 OR1S1Q8NH92 325 aa12.94□□□□□ -0.34
UBC-208ENST00000540700 P2RX4Q99571 388 aa12.94□□□□□ -0.34
UBC-208ENST00000540700 PLEKHA3Q9HB20 300 aa12.94□□□□□ -0.34
UBC-208ENST00000540700 IGLV11-55A0A075B6I3 123 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 PIGBOS1A0A0B4J2F0 54 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 TCRBV4S1A1TA0A5B7 111 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 GOSR2O14653 212 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 BRI3O95415 125 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 TPPP2P59282 170 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 RPL23AP62750 156 aaKnown RBP12.93□□□□□ -0.34
UBC-208ENST00000540700 IAH1Q2TAA2 248 aaPredicted RBP12.93□□□□□ -0.34
UBC-208ENST00000540700 OXLD1Q5BKU9 147 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 ZNF491Q8N8L2 437 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 TMEM170AQ8WVE7 144 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 MAGT1Q9H0U3 335 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 ZNF355PQ9NSJ1 428 aa12.93□□□□□ -0.34
UBC-208ENST00000540700 F11RQ9Y624 299 aaKnown RBP12.93□□□□□ -0.34
UBC-208ENST00000540700 C13orf42A0A1B0GVH6 325 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 FAM25EA8MYX2 175 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 H3BUA1 57 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 OR2J3O76001 311 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 NDUFB8O95169 186 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 IFNA21P01568 189 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 TRGV3P03979 118 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 RNASE2P10153 161 aaKnown RBP12.92□□□□□ -0.34
UBC-208ENST00000540700 HOXA1P49639 335 aaPredicted RBP12.92□□□□□ -0.34
UBC-208ENST00000540700 ID3Q02535 119 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 IL15RAQ13261 267 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 BSXQ3C1V8 233 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 NSUN5P1Q3KNT7 163 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 ZNF114Q8NC26 417 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 PDCD10Q9BUL8 212 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 DNAH3Q8TD57 4116 aa12.92□□□□□ -0.34
UBC-208ENST00000540700 COL7A1Q02388 2944 aa12.91□□□□□ -0.34
UBC-208ENST00000540700 CEBPZOSA8MTT3 80 aa12.91□□□□□ -0.34
UBC-208ENST00000540700 IGHV3-11P01762 117 aa12.91□□□□□ -0.34
UBC-208ENST00000540700 IAPPP10997 89 aa12.91□□□□□ -0.34
UBC-208ENST00000540700 POLR2GP62487 172 aaKnown RBP eCLIP12.91□□□□□ -0.34
UBC-208ENST00000540700 RHOGP84095 191 aa12.91□□□□□ -0.34
UBC-208ENST00000540700 KHDC1LQ5JSQ8 128 aa12.91□□□□□ -0.34
UBC-208ENST00000540700 PVRIGQ6DKI7 326 aa12.91□□□□□ -0.34
UBC-208ENST00000540700 HSD17B13Q7Z5P4 300 aaPredicted RBP12.91□□□□□ -0.34
UBC-208ENST00000540700 NDUFA11Q86Y39 141 aa12.91□□□□□ -0.34
UBC-208ENST00000540700 OR5B12Q96R08 314 aa12.91□□□□□ -0.34
UBC-208ENST00000540700 AURKAIP1Q9NWT8 199 aaPredicted RBP12.91□□□□□ -0.34
UBC-208ENST00000540700 TSSC4Q9Y5U2 329 aaPredicted RBP12.91□□□□□ -0.34
UBC-208ENST00000540700 C5orf51A6NDU8 294 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 FAM90A26D6RGX4 464 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 SSNA1O43805 119 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 TMEM50AO95807 157 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 MBPP02686 304 aaPredicted RBP12.9□□□□□ -0.34
UBC-208ENST00000540700 H2BFSP57053 126 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 TMEM65Q6PI78 240 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 C8orf86Q6ZUL3 223 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 DTD1Q8TEA8 209 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 C2orf50Q96LR7 162 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 SLA2Q9H6Q3 261 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 GSKIPQ9P0R6 139 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 RCL1Q9Y2P8 373 aaKnown RBP12.9□□□□□ -0.34
UBC-208ENST00000540700 S4R3C0 116 aa12.9□□□□□ -0.34
UBC-208ENST00000540700 MFSD2BA6NFX1 497 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 I3L521 148 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 DEFA4P12838 97 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 CXCL3P19876 107 aa12.89□□□□□ -0.35
UBC-208ENST00000540700 CDX1P47902 265 aaPredicted RBP12.89□□□□□ -0.35
UBC-208ENST00000540700 ERHP84090 104 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms