RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 KLK15Q9H2R5 256 aa14.34□□□□□ -0.11
NEK2-205ENST00000540251 CD28P10747 220 aa14.33□□□□□ -0.12
NEK2-205ENST00000540251 NKX2-1P43699 371 aaPredicted RBP14.33□□□□□ -0.12
NEK2-205ENST00000540251 USMG5Q96IX5 58 aa14.33□□□□□ -0.12
NEK2-205ENST00000540251 UBE2E2Q96LR5 201 aa14.33□□□□□ -0.12
NEK2-205ENST00000540251 P2RX4Q99571 388 aa14.33□□□□□ -0.12
NEK2-205ENST00000540251 HINT2Q9BX68 163 aa14.33□□□□□ -0.12
NEK2-205ENST00000540251 NMES1Q9C002 83 aa14.33□□□□□ -0.12
NEK2-205ENST00000540251 RBKSQ9H477 322 aa14.33□□□□□ -0.12
NEK2-205ENST00000540251 CCSO14618 274 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 SYNGR2O43760 224 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 SSNA1O43805 119 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 APELAP0DMC3 54 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 CYCSP99999 105 aaKnown RBP14.32□□□□□ -0.12
NEK2-205ENST00000540251 TMEM65Q6PI78 240 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 SHISA2Q6UWI4 295 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 Q6ZNX1 250 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 ZNF491Q8N8L2 437 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 NECAP1Q8NC96 275 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 SPATA3Q8NHX4 192 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 DMRT1Q9Y5R6 373 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 TSSC4Q9Y5U2 329 aaPredicted RBP14.32□□□□□ -0.12
NEK2-205ENST00000540251 U3KQ87 197 aa14.32□□□□□ -0.12
NEK2-205ENST00000540251 C13orf42A0A1B0GVH6 325 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 C5orf51A6NDU8 294 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 FAM223BA6NKX1 122 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 ADARB2-AS1A8MUL3 147 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 CYB5BO43169 146 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 RPLP1P05386 114 aaKnown RBP14.31□□□□□ -0.12
NEK2-205ENST00000540251 RNASE2P10153 161 aaKnown RBP14.31□□□□□ -0.12
NEK2-205ENST00000540251 HTR2BP41595 481 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 H2BFSP57053 126 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 RUNX1Q01196 453 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 C2orf83Q53S99 150 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 NDUFA11Q86Y39 141 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 FAM223AQ8IWN6 122 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 C3orf56Q8N813 242 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 DTD1Q8TEA8 209 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 CIB3Q96Q77 187 aaPredicted RBP14.31□□□□□ -0.12
NEK2-205ENST00000540251 HIPK2Q9H2X6 1198 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 ENY2Q9NPA8 101 aa14.31□□□□□ -0.12
NEK2-205ENST00000540251 A0A0G2JLM5 398 aa14.3□□□□□ -0.12
NEK2-205ENST00000540251 CEBPZOSA8MTT3 80 aa14.3□□□□□ -0.12
NEK2-205ENST00000540251 MBPP02686 304 aaPredicted RBP14.3□□□□□ -0.12
NEK2-205ENST00000540251 REG1AP05451 166 aa14.3□□□□□ -0.12
NEK2-205ENST00000540251 PF4V1P10720 104 aa14.3□□□□□ -0.12
NEK2-205ENST00000540251 HOXA1P49639 335 aaPredicted RBP14.3□□□□□ -0.12
NEK2-205ENST00000540251 MFAP2P55001 183 aa14.3□□□□□ -0.12
NEK2-205ENST00000540251 TAS2R30P59541 319 aa14.3□□□□□ -0.12
NEK2-205ENST00000540251 RRAS2P62070 204 aaPredicted RBP14.3□□□□□ -0.12
NEK2-205ENST00000540251 RPL23AP62750 156 aaKnown RBP14.3□□□□□ -0.12
NEK2-205ENST00000540251 ASB13Q8WXK3 278 aa14.3□□□□□ -0.12
NEK2-205ENST00000540251 ATP6V0BQ99437 205 aa14.3□□□□□ -0.12
NEK2-205ENST00000540251 CITED2Q99967 270 aaPredicted RBP14.3□□□□□ -0.12
NEK2-205ENST00000540251 THYN1Q9P016 225 aa14.3□□□□□ -0.12
NEK2-205ENST00000540251 GOSR2O14653 212 aa14.29□□□□□ -0.12
NEK2-205ENST00000540251 TRGV3P03979 118 aa14.29□□□□□ -0.12
NEK2-205ENST00000540251 SNCAP37840 140 aa14.29□□□□□ -0.12
NEK2-205ENST00000540251 SUB1P53999 127 aaKnown RBP eCLIP14.29□□□□□ -0.121e-6■■■■■ 30.7
NEK2-205ENST00000540251 SPINK9Q5DT21 86 aa14.29□□□□□ -0.12
NEK2-205ENST00000540251 NOXA1Q86UR1 476 aa14.29□□□□□ -0.12
NEK2-205ENST00000540251 SMIM8Q96KF7 97 aa14.29□□□□□ -0.12
NEK2-205ENST00000540251 RAB40CQ96S21 281 aa14.29□□□□□ -0.12
NEK2-205ENST00000540251 MED28Q9H204 178 aa14.29□□□□□ -0.12
NEK2-205ENST00000540251 C11orf1Q9H5F2 150 aa14.29□□□□□ -0.12
NEK2-205ENST00000540251 HEYLQ9NQ87 328 aaPredicted RBP14.29□□□□□ -0.12
NEK2-205ENST00000540251 TCRBV4S1A1TA0A5B7 111 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 FAM25EA8MYX2 175 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 CORTO00230 105 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 DEFA4P12838 97 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 TPPP2P59282 170 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 RHOGP84095 191 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 FAM209BQ5JX69 171 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 SLC24A4Q8NFF2 622 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 TMEM170AQ8WVE7 144 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 GSKIPQ9P0R6 139 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 MGAT4CQ9UBM8 478 aa14.28□□□□□ -0.12
NEK2-205ENST00000540251 RCL1Q9Y2P8 373 aaKnown RBP14.28□□□□□ -0.12
NEK2-205ENST00000540251 I3L521 148 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 PRH1P02810 166 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 CXCL3P19876 107 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 PAX9P55771 341 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 POLR2GP62487 172 aaKnown RBP eCLIP14.27□□□□□ -0.12
NEK2-205ENST00000540251 FCN2Q15485 313 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 ZNF343Q6P1L6 599 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 C19orf35Q6ZS72 473 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 LCNL1Q6ZST4 164 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 OR11H7Q8NGC8 314 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 VN1R17PQ8TDU5 208 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 C4orf3Q8WVX3 66 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 MS4A10Q96PG2 267 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 ZNF355PQ9NSJ1 428 aa14.27□□□□□ -0.12
NEK2-205ENST00000540251 K7EPK0 472 aa14.26□□□□□ -0.13
NEK2-205ENST00000540251 NXPH3O95157 252 aa14.26□□□□□ -0.13
NEK2-205ENST00000540251 NDUFB8O95169 186 aa14.26□□□□□ -0.13
NEK2-205ENST00000540251 SIX6O95475 246 aa14.26□□□□□ -0.13
NEK2-205ENST00000540251 TMEM50AO95807 157 aa14.26□□□□□ -0.13
NEK2-205ENST00000540251 FCGR2BP31994 310 aaPredicted RBP14.26□□□□□ -0.13
NEK2-205ENST00000540251 SLC25A24Q6NUK1 477 aa14.26□□□□□ -0.13
NEK2-205ENST00000540251 RNASEH2CQ8TDP1 164 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms