RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 G3V3Q6 166 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 TRIM77I1YAP6 450 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 BRI3O95415 125 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 CRYBA1P05813 215 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 SEC11BP0C7V7 166 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 DLX1P56177 255 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 SELENOTP62341 195 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 CX3CL1P78423 397 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 DEFB112Q30KQ8 113 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 BSXQ3C1V8 233 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 SLC35E3Q7Z769 313 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 COMMD1Q8N668 190 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 Q8N9W7 124 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 CXorf58Q96LI9 332 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 PSMG3Q9BT73 122 aaPredicted RBP9.4□□□□□ -0.9
VTN-202ENST00000539746 FBXL17Q9UF56 701 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 TIMM9Q9Y5J7 89 aa9.4□□□□□ -0.9
VTN-202ENST00000539746 F11RQ9Y624 299 aaKnown RBP9.4□□□□□ -0.9
VTN-202ENST00000539746 ABCA12Q86UK0 2595 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 PRRC2AP48634 2157 aaKnown RBP9.39□□□□□ -0.91
VTN-202ENST00000539746 IGHV3OR16-10A0A075B7F0 116 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 A0A0G2JLM5 398 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 FAM24AA6NFZ4 105 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 MSGN1A6NI15 193 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 CST7O76096 145 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 NXPH3O95157 252 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 MT-CO2P00403 227 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 IGF1P05019 195 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 CRYGCP07315 174 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 METTL15P1P0C7V9 234 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 CXCL2P19875 107 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 NPBWR1P48145 328 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 CRIP2P52943 208 aaPredicted RBP9.39□□□□□ -0.91
VTN-202ENST00000539746 AKR1C1Q04828 323 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 IZUMO4Q1ZYL8 232 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 Q5BKY6 102 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 PXDC1Q5TGL8 231 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 OR8G2PQ6IF36 304 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 TEX261Q6UWH6 196 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 CLEC9AQ6UXN8 241 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 TTC9CQ8N5M4 171 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 RNF141Q8WVD5 230 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 TXN2Q99757 166 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 C19orf24Q9BVV8 132 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 C11orf1Q9H5F2 150 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 BOLA1Q9Y3E2 137 aa9.39□□□□□ -0.91
VTN-202ENST00000539746 FBN2P35556 2912 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 TRAV3A0A0B4J244 114 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 IGSF23A1L1A6 192 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 FAM223BA6NKX1 122 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 NUDT19A8MXV4 375 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 H3BP45 60 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 OPRK1P41145 380 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 PAX9P55771 341 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 BLOC1S1P78537 153 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 PRB3Q04118 309 aaPredicted RBP9.38□□□□□ -0.91
VTN-202ENST00000539746 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 LDLRAD2Q5SZI1 272 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 FAM223AQ8IWN6 122 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 DYNAPQ8N1N2 210 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 TMEM217Q8N7C4 229 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 FAM110DQ8TAY7 271 aaPredicted RBP9.38□□□□□ -0.91
VTN-202ENST00000539746 SCARB1Q8WTV0 552 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 ST8SIA2Q92186 375 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 SLC25A32Q9H2D1 315 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 PARP11Q9NR21 331 aa9.38□□□□□ -0.91
VTN-202ENST00000539746 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.38□□□□□ -0.91
VTN-202ENST00000539746 FASNP49327 2511 aaKnown RBP9.38□□□□□ -0.91
VTN-202ENST00000539746 IGLC7A0M8Q6 106 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 SMCO3A2RU48 225 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 AVPP01185 164 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 IGHG2P01859 326 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 CLINT1Q14677 625 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 AKR1C8PQ5T2L2 129 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 UNQ5815/PRO19632Q6UWF5 114 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 NECAP1Q8NC96 275 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 ZNF680Q8NEM1 530 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 VN1R17PQ8TDU5 208 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 TMEM190Q8WZ59 177 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 USMG5Q96IX5 58 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 RNF2Q99496 336 aa9.37□□□□□ -0.91
VTN-202ENST00000539746 IGHV7-81A0A0B4J1V7 117 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 TRAV41A0A0B4J266 112 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 C15orf62A8K5M9 175 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 OPN1MWP04001 364 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 OPN1MW2P0DN77 364 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 OPN1MW3P0DN78 364 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 RNASE2P10153 161 aaKnown RBP9.36□□□□□ -0.91
VTN-202ENST00000539746 CTRB1P17538 263 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 CD24P25063 80 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 NHLH2Q02577 135 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 CD69Q07108 199 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 C9orf152Q5JTZ5 239 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 CTRB2Q6GPI1 263 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 Q6ZRG5 221 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 SLC16A13Q7RTY0 426 aa9.36□□□□□ -0.91
VTN-202ENST00000539746 TMEM144Q7Z5S9 345 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms