RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 PRSS22Q9GZN4 317 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 DUS4LO95620 317 aaKnown RBP12.26□□□□□ -0.45
DDB1-216ENST00000539739 H2BFWTQ7Z2G1 175 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 PPP1R27Q86WC6 154 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 SELENOHQ8IZQ5 122 aaKnown RBP12.26□□□□□ -0.45
DDB1-216ENST00000539739 OR4A5Q8NH83 315 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 STOML3Q8TAV4 291 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
DDB1-216ENST00000539739 SEC22AQ96IW7 307 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 TMEM140Q9NV12 185 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 BET1LQ9NYM9 111 aa12.26□□□□□ -0.45
DDB1-216ENST00000539739 KBTBD11O94819 623 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 AMY1AP04745 511 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 CRYGBP07316 175 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 HOXB5P09067 269 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 HOXA5P20719 270 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 CDX1P47902 265 aaPredicted RBP12.25□□□□□ -0.45
DDB1-216ENST00000539739 BLCAPP62952 87 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 TNFRSF9Q07011 255 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 OR4A47Q6IF82 309 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 C16orf54Q6UWD8 224 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 CLCC1Q96S66 551 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 PHB2Q99623 299 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 ARL6Q9H0F7 186 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 PRR13Q9NZ81 148 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 GOLT1BQ9Y3E0 138 aa12.25□□□□□ -0.45
DDB1-216ENST00000539739 A0A0B4J2A0 478 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 DUXBA0A1W2PPF3 345 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 ACTL6BO94805 426 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 LY86O95711 162 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 HLA-DRB1P01911 266 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 METTL15P1P0C7V9 234 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 BLOC1S1P78537 153 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 SRSF2Q01130 221 aaKnown RBP12.24□□□□□ -0.45
DDB1-216ENST00000539739 ANKRD55Q3KP44 614 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 ARSJQ5FYB0 599 aaPredicted RBP12.24□□□□□ -0.45
DDB1-216ENST00000539739 IL34Q6ZMJ4 242 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 FAM219AQ8IW50 185 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 MMD2Q8IY49 270 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 ZFP82Q8N141 532 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 LRTM2Q8N967 370 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 OR52B4Q8NGK2 314 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 TMEM167AQ8TBQ9 72 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 MGAT4CQ9UBM8 478 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 SHPKQ9UHJ6 478 aa12.24□□□□□ -0.45
DDB1-216ENST00000539739 SIX6O95475 246 aa12.23□□□□□ -0.45
DDB1-216ENST00000539739 PRSS8Q16651 343 aa12.23□□□□□ -0.45
DDB1-216ENST00000539739 TMEM95Q3KNT9 176 aa12.23□□□□□ -0.45
DDB1-216ENST00000539739 PRIMA1Q86XR5 153 aa12.23□□□□□ -0.45
DDB1-216ENST00000539739 SLC35G3Q8N808 338 aa12.23□□□□□ -0.45
DDB1-216ENST00000539739 MITD1Q8WV92 249 aa12.23□□□□□ -0.45
DDB1-216ENST00000539739 NDUFAF3Q9BU61 184 aa12.23□□□□□ -0.45
DDB1-216ENST00000539739 TPSG1Q9NRR2 321 aa12.23□□□□□ -0.45
DDB1-216ENST00000539739 MMP24Q9Y5R2 645 aa12.23□□□□□ -0.45
DDB1-216ENST00000539739 SH2D7A6NKC9 451 aaPredicted RBP12.22□□□□□ -0.45
DDB1-216ENST00000539739 UPK2O00526 184 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 FCN1O00602 326 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 KCNAB3O43448 404 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 CNIH1O95406 144 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 CA2P00918 260 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 IFNA17P01571 189 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 IGKV1-5P01602 117 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 VDAC1P21796 283 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 MAS1LP35410 378 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 RPL8P62917 257 aaKnown RBP12.22□□□□□ -0.45
DDB1-216ENST00000539739 ZNF562Q6V9R5 426 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 LSM10Q969L4 123 aaKnown RBP12.22□□□□□ -0.45
DDB1-216ENST00000539739 MISP3Q96FF7 219 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 ZNF430Q9H8G1 570 aaPredicted RBP12.22□□□□□ -0.45
DDB1-216ENST00000539739 GAR1Q9NY12 217 aaKnown RBP12.22□□□□□ -0.45
DDB1-216ENST00000539739 DLEU1O43261 78 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 GGCTO75223 188 aaKnown RBP12.22□□□□□ -0.45
DDB1-216ENST00000539739 RBMXL2O75526 392 aaKnown RBP12.22□□□□□ -0.45
DDB1-216ENST00000539739 IL6RP08887 468 aaPredicted RBP12.22□□□□□ -0.45
DDB1-216ENST00000539739 HKR1P10072 659 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 GNB1P62873 340 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 CX3CL1P78423 397 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 PJVKQ0ZLH3 352 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 ZNF345Q14585 488 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 TNXAQ16473 311 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 Q6ZSV7 163 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 LYZL2Q7Z4W2 148 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 SLC35E3Q7Z769 313 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 OR4A16Q8NH70 328 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 OR2T6Q8NHC8 308 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 HIST1H2BAQ96A08 127 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 ZNF702PQ9H963 129 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 PRNDQ9UKY0 176 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 TMED3Q9Y3Q3 217 aa12.22□□□□□ -0.45
DDB1-216ENST00000539739 C2CD3Q4AC94 2353 aa12.21□□□□□ -0.45
DDB1-216ENST00000539739 ELOA3CA0A087WX78 387 aaPredicted RBP12.21□□□□□ -0.46
DDB1-216ENST00000539739 IGHV7-81A0A0B4J1V7 117 aa12.21□□□□□ -0.46
DDB1-216ENST00000539739 NDUFA7O95182 113 aa12.21□□□□□ -0.46
DDB1-216ENST00000539739 IFNA21P01568 189 aa12.21□□□□□ -0.46
DDB1-216ENST00000539739 IGHG2P01859 326 aa12.21□□□□□ -0.46
DDB1-216ENST00000539739 HAGHQ16775 308 aa12.21□□□□□ -0.46
DDB1-216ENST00000539739 PYY3Q5JQD4 70 aa12.21□□□□□ -0.46
DDB1-216ENST00000539739 Q8N2B8 174 aa12.21□□□□□ -0.46
DDB1-216ENST00000539739 BSCL2Q96G97 398 aaPredicted RBP12.21□□□□□ -0.46
DDB1-216ENST00000539739 HSPB9Q9BQS6 159 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms