RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 FGF2P09038 288 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 P2RY1P47900 373 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 POLR2GP62487 172 aaKnown RBP eCLIP10.16□□□□□ -0.78
CCDC42-202ENST00000539522 GNB1P62873 340 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 VAMP2P63027 116 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 KIAA0141Q14154 515 aaPredicted RBP10.16□□□□□ -0.78
CCDC42-202ENST00000539522 C19orf35Q6ZS72 473 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 LCNL1Q6ZST4 164 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 ZNF429Q86V71 674 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 MMD2Q8IY49 270 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 C11orf44Q8N8P7 122 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 SGMS2Q8NHU3 365 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 ARPC1AQ92747 370 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 HSPB7Q9UBY9 170 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 PRNDQ9UKY0 176 aa10.16□□□□□ -0.78
CCDC42-202ENST00000539522 RCL1Q9Y2P8 373 aaKnown RBP10.16□□□□□ -0.78
CCDC42-202ENST00000539522 PKD1L1Q8TDX9 2849 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 AP4M1O00189 453 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 KCNAB3O43448 404 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 IGLV1-40P01703 118 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 OPN1MWP04001 364 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 APELAP0DMC3 54 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 OPN1MW2P0DN77 364 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 OPN1MW3P0DN78 364 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 CXCL2P19875 107 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 TAS2R30P59541 319 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 OR2B8PP59922 312 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 SPCS3P61009 180 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 RPL23AP62750 156 aaKnown RBP10.15□□□□□ -0.78
CCDC42-202ENST00000539522 TNFRSF9Q07011 255 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 ZNF345Q14585 488 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 TNXAQ16473 311 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 TMUB2Q71RG4 321 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 KCNRGQ8N5I3 272 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 LFNGQ8NES3 379 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 SRSF12Q8WXF0 261 aaKnown RBP10.15□□□□□ -0.78
CCDC42-202ENST00000539522 SMIM8Q96KF7 97 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 MAGT1Q9H0U3 335 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 KLK15Q9H2R5 256 aa10.15□□□□□ -0.78
CCDC42-202ENST00000539522 TRAV41A0A0B4J266 112 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 TEX50A0A1B0GTY4 177 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 MSGN1A6NI15 193 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 IFNA17P01571 189 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 IGHG4P01861 327 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 RPL12P30050 165 aaKnown RBP10.14□□□□□ -0.79
CCDC42-202ENST00000539522 S100A11P31949 105 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 MAS1LP35410 378 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 HSPE1P61604 102 aaKnown RBP10.14□□□□□ -0.79
CCDC42-202ENST00000539522 RPL8P62917 257 aaKnown RBP10.14□□□□□ -0.79
CCDC42-202ENST00000539522 PDLIM3Q53GG5 364 aaPredicted RBP10.14□□□□□ -0.79
CCDC42-202ENST00000539522 C12orf54Q6X4T0 127 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 C18orf65Q6ZTR6 163 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 RNF152Q8N8N0 203 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 OR5AU1Q8NGC0 362 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 MYOZ3Q8TDC0 251 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 AQP10Q96PS8 301 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 CIB3Q96Q77 187 aaPredicted RBP10.14□□□□□ -0.79
CCDC42-202ENST00000539522 QTRT1Q9BXR0 403 aaKnown RBP10.14□□□□□ -0.79
CCDC42-202ENST00000539522 SLC25A31Q9H0C2 315 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 RBKSQ9H477 322 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 C11orf1Q9H5F2 150 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 TMEM14BQ9NUH8 114 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 FOXA2Q9Y261 457 aaPredicted RBP10.14□□□□□ -0.79
CCDC42-202ENST00000539522 ZNF257Q9Y2Q1 563 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 DMRT1Q9Y5R6 373 aa10.14□□□□□ -0.79
CCDC42-202ENST00000539522 IGLC7A0M8Q6 106 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 PSMB11A5LHX3 300 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 C15orf61A6NNL5 157 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 SSSCA1O60232 199 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 AREGP15514 252 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 PSMB8P28062 276 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 AP2S1P53680 142 aaPredicted RBP10.13□□□□□ -0.79
CCDC42-202ENST00000539522 PAX9P55771 341 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 OPCMLQ14982 345 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 ECSCRQ19T08 205 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 AKIRIN2Q53H80 203 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 OR2C3Q8N628 320 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 OR10W1Q8NGF6 305 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 SPATA3Q8NHX4 192 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 CITED2Q99967 270 aaPredicted RBP10.13□□□□□ -0.79
CCDC42-202ENST00000539522 ZC4H2Q9NQZ6 224 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 OR51B2Q9Y5P1 312 aa10.13□□□□□ -0.79
CCDC42-202ENST00000539522 RNF222A6NCQ9 220 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 CEBPZOSA8MTT3 80 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 TAAR5O14804 337 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 ACTL6BO94805 426 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 NXPH3O95157 252 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 RPLP1P05386 114 aaKnown RBP10.12□□□□□ -0.79
CCDC42-202ENST00000539522 RPP30P78346 268 aaKnown RBP10.12□□□□□ -0.79
CCDC42-202ENST00000539522 DEFA5Q01523 94 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 WT1-ASQ06250 92 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 ARSJQ5FYB0 599 aaPredicted RBP10.12□□□□□ -0.79
CCDC42-202ENST00000539522 UNQ5815/PRO19632Q6UWF5 114 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 CENPVQ7Z7K6 275 aaPredicted RBP10.12□□□□□ -0.79
CCDC42-202ENST00000539522 GON7Q9BXV9 100 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 ARL6Q9H0F7 186 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 HIPK2Q9H2X6 1198 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 NDUFA4L2Q9NRX3 87 aa10.12□□□□□ -0.79
CCDC42-202ENST00000539522 LYRM2Q9NU23 88 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms