RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 TP73-AS1Q9UF72 201 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 SLC35A3Q9Y2D2 325 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 NDUFAF1Q9Y375 327 aa1.68□□□□□ -2.14
SNHG1-210ENST00000539303 TRPM6Q9BX84 2022 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 SPATA31E1Q6ZUB1 1445 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 LTBP4Q8N2S1 1624 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 IGHV3-15A0A0B4J1V0 119 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 IGKV1D-43A0A0B4J1Z2 117 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 A0A1W2PQD3 144 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 FABP5P3A8MUU1 101 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 TSTD3H0UI37 97 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 H3BPC8 53 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 PSCAO43653 123 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 BANF1O75531 89 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 IFNA7P01567 189 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 IGKV1-5P01602 117 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 LGALS1P09382 135 aaKnown RBP1.67□□□□□ -2.14
SNHG1-210ENST00000539303 CBR1P16152 277 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 CASP1P29466 404 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 CA5AP35218 305 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 GLRXP35754 106 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 CCR2P41597 374 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 XCL1P47992 114 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 HIST1H4AP62805 103 aaKnown RBP1.67□□□□□ -2.14
SNHG1-210ENST00000539303 ALX1Q15699 326 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 MIAQ16674 131 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 DEFB134Q4QY38 66 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.67□□□□□ -2.14
SNHG1-210ENST00000539303 KRTAP5-4Q6L8H1 288 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 DCUN1D2Q6PH85 259 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 OR10D4PQ8NGN7 298 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 OR5C1Q8NGR4 320 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 GRPEL2Q8TAA5 225 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 DYDC1Q8WWB3 177 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 TMEM70Q9BUB7 260 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 DERL1Q9BUN8 251 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 SLC39A9Q9NUM3 307 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 MRPL16Q9NX20 251 aaKnown RBP1.67□□□□□ -2.14
SNHG1-210ENST00000539303 NAT8Q9UHE5 227 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 MINOS1-NBL1R4GNA1 71 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 PLXND1Q9Y4D7 1925 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 CCDC88AQ3V6T2 1871 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 ZNF106Q9H2Y7 1883 aaKnown RBP1.67□□□□□ -2.14
SNHG1-210ENST00000539303 NYNRINQ9P2P1 1898 aaKnown RBP1.67□□□□□ -2.14
SNHG1-210ENST00000539303 MYH11P35749 1972 aa1.67□□□□□ -2.14
SNHG1-210ENST00000539303 SHANK1Q9Y566 2161 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 TRBV19A0A075B6N1 114 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 TRAV41A0A0B4J266 112 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 TRAV4A0A0B4J268 109 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 MAP1LC3B2A6NCE7 125 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 TMEM235A6NFC5 223 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 SIGLEC16A6NMB1 481 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 TRAPPC2LH3BP13 241 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 H3BT86 120 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 J3QRK9 145 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 CREBL2O60519 120 aaPredicted RBP1.66□□□□□ -2.14
SNHG1-210ENST00000539303 CST8O60676 142 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 PFDN1O60925 122 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 HRES1P13985 223 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 GZMHP20718 246 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 COL8A2P25067 703 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 S100GP29377 79 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 PIGPP57054 158 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 ARPC4P59998 168 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 LYRM7Q5U5X0 104 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 BPIFA4PQ86YQ2 179 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 DNAJC9Q8WXX5 260 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 LYSMD1Q96S90 227 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 IMMP2LQ96T52 175 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 MAP1LC3BQ9GZQ8 125 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 AICDAQ9GZX7 198 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 RBM7Q9Y580 266 aaKnown RBP1.66□□□□□ -2.14
SNHG1-210ENST00000539303 COL1A2P08123 1366 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 NID2Q14112 1375 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 PLXNB1O43157 2135 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 SHANK3Q9BYB0 1731 aa1.66□□□□□ -2.14
SNHG1-210ENST00000539303 A0A0J9YW62 118 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 IRGMA1A4Y4 181 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 C11orf86A6NJI1 115 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 C1orf196B1AJZ1 125 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 BUB1B-PAK6H3BSN5 160 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 OR2J2O76002 312 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 IGHV3-7P01780 117 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 APOA2P02652 100 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 C1QAP02745 245 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 BPGMP07738 259 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 NBEAP1P0C6P0 100 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 CCL5P13501 91 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 CD24P25063 80 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 S100A4P26447 101 aaKnown RBP1.65□□□□□ -2.15
SNHG1-210ENST00000539303 G6PCP35575 357 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 GABRA4P48169 554 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 PSMD8P48556 350 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 ZNF80P51504 273 aaPredicted RBP1.65□□□□□ -2.15
SNHG1-210ENST00000539303 TPI1P60174 286 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 SARNPP82979 210 aaKnown RBP1.65□□□□□ -2.15
SNHG1-210ENST00000539303 BAMBIQ13145 260 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 SCGB2B2Q4G0G5 96 aa1.65□□□□□ -2.15
SNHG1-210ENST00000539303 SPANXN3Q5MJ09 141 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms